Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01898 ATGGCAGTGCTTGGTTCTGGAGAATTCCTTGTGGCATTTCTTCTTTTCATTTTAATCTACTACCTGGCAAGTTTTCAGTTGTTTATTCACAAAACAATCATGAACAAGATTGAGAGTTGTCTGCTTCCATTCCTTGATCATGCATGGAAAGAAGGAATGGAAGTGGACCTACAATATGTTTTTCAAAGGTTAACCTTTGACAACATTTGCTCTATAGTATTAGGATTTGATCCTAATTGTCTTTCCATCGAATTCCCAGAAGTTGCTTGTGAGAGAGCCTTCACGGATGTAGAGGATGCCGTGTTCTACAGACATGTAATGCCAAGATGCATGTGGAAGCTGCTGAAATGGCTTCAAGTTGGAAAAGAGAAGAAGCTGAAAGAAAGCCTGAAAATTATTGACCAAATGTTGTATAAAGAAATCAGATCCAAGGCCAAAGCAGTAAGGGAAAAAATAGATGACAAGTTTCTGAGAGACACAGCAATTAATCTCCTTGCAGCTGGGAGAGACACCATTAGTGCAGGTCTCAGTTGGTTTTTCTGGCTGGTGGCAACACACCCATCTGTGGAATCGAAGATTCTTGAAGAGATCCAAGATAATTTACCAGCAAGAGAAGGTAATTGGAAGGATTTAGGCGTGGAATGGTTTAGCAAGTTAATTTACCTCCATGCAGCAATAAGTGAAGCCTTAAGGCTTCATCCTCCAGTACCATTTGAGCACAAGTGTGCCTTAAAATCTGATATGCTTCCTAGTGGTGGTCATTGGATTAATTCAAATACCATGATAGTATATTCTCTATACACCATGGGAAGGGCAGAGGAAATATGGGGTGAAGATTGCTTGAAATTTAGACCAGAGAGGTGGTTTTCTAAGAGAGGAGGGATTATTCACATACCCTCTTACAAGTTCATTGCATTCAATGCAGGACCAAGAAGTTGTTTGGGTAAGGACATAAGCTTCACTGAGATGAAGATGGTTGCTGCAGCTATATTGTGGAATTATCACATTCACTTGGAGGAAGGTCACACAATATCCCCAAGAGTTTCCAGTGTCCTTCATATGAAACATGGCTTGAAGGTTAGAGTGACAAAAAGAAACATCTGTGATCAAGGGATCTAA 1119 0.4021 MAVLGSGEFLVAFLLFILIYYLASFQLFIHKTIMNKIESCLLPFLDHAWKEGMEVDLQYVFQRLTFDNICSIVLGFDPNCLSIEFPEVACERAFTDVEDAVFYRHVMPRCMWKLLKWLQVGKEKKLKESLKIIDQMLYKEIRSKAKAVREKIDDKFLRDTAINLLAAGRDTISAGLSWFFWLVATHPSVESKILEEIQDNLPAREGNWKDLGVEWFSKLIYLHAAISEALRLHPPVPFEHKCALKSDMLPSGGHWINSNTMIVYSLYTMGRAEEIWGEDCLKFRPERWFSKRGGIIHIPSYKFIAFNAGPRSCLGKDISFTEMKMVAAAILWNYHIHLEEGHTISPRVSSVLHMKHGLKVRVTKRNICDQGI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01898 372 Gene3D Cytochrome P450 22 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 306 315 IPR017972 GO:0005506|GO:0016705
Pumo5g01898 372 PANTHER CYTOCHROME P450 24 360 - -
Pumo5g01898 372 Pfam Cytochrome P450 150 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS E-class P450 group I signature 303 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS E-class P450 group I signature 156 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS E-class P450 group I signature 223 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS E-class P450 group I signature 176 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS E-class P450 group I signature 313 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS P450 superfamily signature 304 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS P450 superfamily signature 224 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 PRINTS P450 superfamily signature 167 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01898 372 SUPERFAMILY Cytochrome P450 25 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01898 Pumo-Chr5 53390020 53391505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01898 25 366 Cytochrome P450 AT2G23180 43.583 2.11e-115 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01898 - - gmx:100785815 592.423