Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01872 ATGGACATCAAATCAAACATAAAGTATGGTTGCCCCAGGAACATAAAACAAGAAGATATTGAACAGGCAGCGAAAAAGGCCAATGCCCATGACTTTATTTCTTCACTTCCTAATAGATATGAAACCCTTGTTGATGACAATGCACTTAGTGGTGGACAAAAGCAGCGAATTGCCATCGCCAGAGCGATTCTTAGGGACCCTGTTATTATGATACTTGATGAAGCAACCAGTGCTCTAGACTCTGAGAGTGAGCATTATATCAAGGAGGTGCTGTATGCGCTGAAAGATGAACCTAAGACAAGAACCGTCATTATCATAGCACATAGGCTTTCTACTATAAAAGCTGCTGATAAGATCTTTGTTATGGATGATGGTCGCATCGTTGAGATGGGAGATCATGTAGAGCTTCTGCTCAAGGACGGCCTTTATGCAAAATTAAATAAAATTCAAGCAGATATTTTGACTTGA 468 0.4017 MDIKSNIKYGCPRNIKQEDIEQAAKKANAHDFISSLPNRYETLVDDNALSGGQKQRIAIARAILRDPVIMILDEATSALDSESEHYIKEVLYALKDEPKTRTVIIIAHRLSTIKAADKIFVMDDGRIVEMGDHVELLLKDGLYAKLNKIQADILT 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01872 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 150 IPR027417 -
Pumo5g01872 155 Gene3D - 3 150 IPR027417 -
Pumo5g01872 155 PANTHER ABC TRANSPORTER B FAMILY 1 147 IPR039421 -
Pumo5g01872 155 ProSitePatterns ABC transporters family signature. 49 63 IPR017871 GO:0005524|GO:0016887
Pumo5g01872 155 Pfam ABC transporter 20 77 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01872 Pumo-Chr5 52701013 52702058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01872 3 150 Calmodulin-binding Proteins AT2G36910 53.947 1.33e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01872 - - gmx:100797529 280.026