Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01849 ATGAACTCCAAAAAAAGCTTCTCCTCTTCAAATCCAAAAATCCACCACCACCACCACCACTACCACAACAACAACAACAACAACAACCCATCATCATGGGTTATCTTCAACATAGTTTTTTTCTCATCTCTATCCCTGTCACTCTCCGATCCAAGGATCACCGAAGCAGGGCTCTACTGCGGCACCGCCAAGGCCCCTATGAAGGCAAACTACATCCCCAGCTTCATCAAGGAAATGGAGAGCCTCTCGCAGCTAGTAACCAACCAAAACTGGGGCAATCAATTGGTTAACATTTCAGGCATTCCTATTTACGGCTTCGCGCAGTGCTTCAACGACCTCTCCCACACCGACTGCCTCCTCTGCTACGCCGCGAGCCGCACCAGGCTCCCGCGCTGCCTCCCTTCCGTCGCGGCGCGCATCTACCTCGACGGCTGCTTCCTCCGCTACGACAACTACAGTTTTTATTCCGAGGAGACTGACCCTTCGAGGGACGCGGTGAACTGCACCTCGCAGCGTGGGGTGGCTGGTGATGAGGATGAGAGAGTGGAGCTTGAGGGGAGGGTCGGGAGAGTGGTGGAGAGTGTGGTTGACGTGGCTGTGGGGAATGGTGGTGGCTTTGCTGTGGGGGAGGTTGAGGGGGTCTATGCTTTGGCACAGTGCTGGAATACTCTTGGGAGTGGTGGGTGCAGAGAGTGCTTGAGGAAAGCTGGGAGGGAGGTGAAGGGGTGCTTGCCCAAGAGGGAAGGGAGGGCTTTGAATGCTGGATGTTATTTGAGGTATTCGACGCAGAAGTTTTACAGTGAAGGTGGTGATGCACGTGGTAGAAATGGGTTCTTAAGAAGAAGAGGAGTCATAGTAGCAGAGGTGTTAGCAGCAGCTGCAGTTTTAATGCTTGCTCTCTCTGCCTCTTATGCAGCCTTCACAAAATTCTCAAAGATAAAAAAAGAAAACAATAATCTTGGTCACATTTCCTCTTCCATAAGCAAATCTAGCTTGAATTATAAATACGAAACTCTTGAGAAGGCCACAGATTATTTCAACTCTTCAAGAAAAATAGGCCAAGGTGGAGCTGGTTCAGTTTTCAAAGGTATTCTCCCAAATGGGAAAGTTGTAGCTGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAATGAAGTGAATTTGATTAGCGGAATTGAACACAAGAACCTTGTCAAACTATTGGGTTGTAGCATTGAAGGCCCAGAGAGCCTCCTTGTGTATGAGTACTTACCCAAAAAGAGTTTAGACCAATTTATCTTTGAAAAGAACAGAACTCAGATTCTAAACTGGAAGGAGCGGTTTAATATCATTGTTGGAACAGCAGAAGGGCTTGCATATCTTCATGAAGGCACTAAAATAAGAATCATCCATAGAGACATCAAAAGCAGCAACGTTCTTCTGGACGAGAATCTCATTCCCAAGATTGCAGATTTCGGCCTTGTTCGGTGTTTTGGTGCTGATAAGTCACATTTGAGCACTGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTACCTAATTCAAGGACAACTCACAGATAAAGCTGATGTCTATAGTTATGGAGTACTTGTTCTGGAGATTGTGAGTGGCAGGAGGAATAATGTCTTCAGAGAGGACTCTGGCTCGCTTCTACAAACTGTTTGGAAACTCTACCGATCAAACACATTAACTGAAGCTGTTGATCCTTGCTTGGGAGATGATTGTCCTGCAACTGAAGCATCAAGGGTGTTTCTAATTGGATTGCTTTGCACACAAGCTTCAGCTTCCTTAAGGCCATCCATGTCACAAGTTGTCTACATGCTAAGTAATTCAAATGTAGATGTTCCTACACCAAATCAACCCCCATTTTTGAACACTGGAATGCTAGACTCAGATAGTTCCATCAAGTCTTATAGCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGTGTCCTACAGCTACTCAGAGTCCTCTAGTTCGCGAAATTCAGATGGGCCATCAAGAAGTGAAGAATCAATTGTCCAAGTTTGA 2058 0.4606 MNSKKSFSSSNPKIHHHHHHYHNNNNNNNPSSWVIFNIVFFSSLSLSLSDPRITEAGLYCGTAKAPMKANYIPSFIKEMESLSQLVTNQNWGNQLVNISGIPIYGFAQCFNDLSHTDCLLCYAASRTRLPRCLPSVAARIYLDGCFLRYDNYSFYSEETDPSRDAVNCTSQRGVAGDEDERVELEGRVGRVVESVVDVAVGNGGGFAVGEVEGVYALAQCWNTLGSGGCRECLRKAGREVKGCLPKREGRALNAGCYLRYSTQKFYSEGGDARGRNGFLRRRGVIVAEVLAAAAVLMLALSASYAAFTKFSKIKKENNNLGHISSSISKSSLNYKYETLEKATDYFNSSRKIGQGGAGSVFKGILPNGKVVAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRTQILNWKERFNIIVGTAEGLAYLHEGTKIRIIHRDIKSSNVLLDENLIPKIADFGLVRCFGADKSHLSTGIAGTLGYMAPEYLIQGQLTDKADVYSYGVLVLEIVSGRRNNVFREDSGSLLQTVWKLYRSNTLTEAVDPCLGDDCPATEASRVFLIGLLCTQASASLRPSMSQVVYMLSNSNVDVPTPNQPPFLNTGMLDSDSSIKSYSTNSFISNALKKIGVSYSYSESSSSRNSDGPSRSEESIVQV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01849 685 FunFam Cysteine-rich receptor-like protein kinase 2 53 154 - -
Pumo5g01849 685 Gene3D Transferase(Phosphotransferase) domain 1 422 623 - -
Pumo5g01849 685 SUPERFAMILY Protein kinase-like (PK-like) 329 644 IPR011009 -
Pumo5g01849 685 ProSiteProfiles Protein kinase domain profile. 346 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01849 685 MobiDBLite consensus disorder prediction 1 23 - -
Pumo5g01849 685 SMART serkin_6 346 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01849 685 ProSiteProfiles Gnk2-homologous domain profile. 53 154 IPR002902 -
Pumo5g01849 685 Gene3D Phosphorylase Kinase; domain 1 306 421 - -
Pumo5g01849 685 CDD STKc_IRAK 352 614 - -
Pumo5g01849 685 Gene3D - 57 154 IPR038408 -
Pumo5g01849 685 Gene3D - 177 265 IPR038408 -
Pumo5g01849 685 ProSiteProfiles Gnk2-homologous domain profile. 166 265 IPR002902 -
Pumo5g01849 685 Pfam Protein kinase domain 347 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01849 685 FunFam Cysteine-rich receptor-like protein kinase 2 312 421 - -
Pumo5g01849 685 MobiDBLite consensus disorder prediction 664 685 - -
Pumo5g01849 685 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 104 662 - -
Pumo5g01849 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pumo5g01849 685 FunFam Cysteine-rich receptor-like protein kinase 2 422 622 - -
Pumo5g01849 685 FunFam Cysteine-rich receptor-like protein kinase 3 167 265 - -
Pumo5g01849 685 Pfam Salt stress response/antifungal 211 262 IPR002902 -
Pumo5g01849 685 Pfam Salt stress response/antifungal 99 152 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01849 Pumo-Chr5 51711717 51716123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01849 34 511 Receptor kinase-like Gene Family AT5G40380 57.292 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo5g01849 Pkinase 2.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01849 - - gmx:100790404 1088.56