Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01811 ATGACCAATTGTGTGGAGGATGAGGTGAAGAGAACACTGATACAGTTTCTGGCACAAGTCTCAGGTAATATTAATGATGGCCAACAACAGAACTCCACTTTGGTTTGGAAACAAGACTCTGATCCTTGCAAGGATCTTTGGCAAGGTGTATATTGTGATCCTCAAAACATGTCCATAAAGCGGTTGTTACTTGACAGGCTCAATTTGTCTGGAACTCTTGATGTTGCTATACTGTGCAACTTGCAGCCCCTGGCTGCATCTCTCACCTTTCTTAGCCTAGATGGTAACAAAATTAGTGGGGTGATAGCATCTGAGATTGGGAACTGCAAACAACTCACTCGCCTACACCTTAGTGGAAACCAACTTGCTGGAGGCCTTCCTAGTTCACTTGCCATGCTAAACAGTTTGAAGAGACTAGACATTTCGAATAACGAGTTTTCGGGACCTTTGCCAAACTTGTCCAGAATCTCAGGGCTGAACATGTTCCTTGCACAAAACAATTACCTCAGAGGAACCATACCCGCCTTTGATTTCTCCAATTTTGACCAATTCAATGTCTCCTTTAACAATTTCAGTGGCCGCATTCCAAACGTGCGTGGCTATTTCTCTGCTGACAGCTTCCTTGGTAATCCTGAACTATGTGGAGATCCGCTACCAAAAAATTGTTTTGGTCAGCCTATGTCTCTTAGTGAGGCTCAGGCACAAGAAGAATCAAAGGGTCCTTCTAAGGAGCAGATTCTTATGTACTCAGGCTATGCTGCATTGGGTGTTATCATTGTCCTTTTTGTAGTCTTAAAGCTGTGTAGAAGAAAGAAGAGAGAGAATAAAATTGAAGCATTGAATAATGGGGTAGGGGCCACTGATGGTGGTGTTGAAAAGCACAGCAATGTTTCAAGTGAATACAAAGCTGAGGTAAGCAGATCTGAGTTTTCAGTAGCTTCTGAAAGTGGGATGGTTTCACAATCACTCATAGTTCTTTCAAGGCCAGCGGCAATTAAATTGAAATTGGAGGACTTGTTGAGGGCCCCTGCAGAATTGATTGGCAGAGGAAAAAATGGAAGTCTTTATAAGGTGATGCTTGACAATGGGATAATGGTGGTTGTGAAGAGGATCAAGGATTGGACTATTTCAAGCCACGATTTCAAGCAAAGAATGCAAATACTGAGTCAAGCAAAGCACGCTCATGTACTGTCACCTCTTGCTTTCTATTGCTCCAAACAAGAAAAACTTTTGGTGTATGAATATCAGCAGAATGGAAGTTTATTCAAGCTTCTACATGGTACTCCAAAAACCTTTGACTGGACCAGCAGACTTGGGATAGCAGCTACAATTGCTGAGGCATTAGCTTTCATGCATCAAGAGCTGGGCCATCATGGTATTGTTCATGGTAACCTTAAATCCTCGAACATTTTGCTAAACAAGAATATGGAGCCATGTATAAGTGAATATGGTGTTATGGGTATGGATGATCAAAGAGGTTCACCTTTTGTCAGTCCTATTGATGCTGGTGCATTAGATATCTTTAAGGAAGATGTTTATGGCTTTGGTGTGATTCTTCTTGAACTGCTTACTGGTAAGTTAGTGAAGGGCAATGGGATTGACTTGACTGACTGGGTTCAGTCAGTTGTGAGGGAAGAATGGACAGGTGAAGTCTTTGACAAGTCTCTAATATCAGAGTATGCAAGTGAAGAGAGGATGGTCAATTTGCTTCAGGTGGCTATAAAATGTGTCAATCGTTCACCAGAGGCTAGGCCAAGCATGAACCAAGTTGCTCTCATCATTAACACTATCAAAGAGGACGAAGAAAAATCCTTGATTTATGAAGTGTGA 1830 0.4197 MTNCVEDEVKRTLIQFLAQVSGNINDGQQQNSTLVWKQDSDPCKDLWQGVYCDPQNMSIKRLLLDRLNLSGTLDVAILCNLQPLAASLTFLSLDGNKISGVIASEIGNCKQLTRLHLSGNQLAGGLPSSLAMLNSLKRLDISNNEFSGPLPNLSRISGLNMFLAQNNYLRGTIPAFDFSNFDQFNVSFNNFSGRIPNVRGYFSADSFLGNPELCGDPLPKNCFGQPMSLSEAQAQEESKGPSKEQILMYSGYAALGVIIVLFVVLKLCRRKKRENKIEALNNGVGATDGGVEKHSNVSSEYKAEVSRSEFSVASESGMVSQSLIVLSRPAAIKLKLEDLLRAPAELIGRGKNGSLYKVMLDNGIMVVVKRIKDWTISSHDFKQRMQILSQAKHAHVLSPLAFYCSKQEKLLVYEYQQNGSLFKLLHGTPKTFDWTSRLGIAATIAEALAFMHQELGHHGIVHGNLKSSNILLNKNMEPCISEYGVMGMDDQRGSPFVSPIDAGALDIFKEDVYGFGVILLELLTGKLVKGNGIDLTDWVQSVVREEWTGEVFDKSLISEYASEERMVNLLQVAIKCVNRSPEARPSMNQVALIINTIKEDEEKSLIYEV 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01811 609 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 80 173 - -
Pumo5g01811 609 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Pumo5g01811 609 PANTHER OS05G0588300 PROTEIN 10 599 - -
Pumo5g01811 609 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pumo5g01811 609 SUPERFAMILY L domain-like 36 199 - -
Pumo5g01811 609 Gene3D Transferase(Phosphotransferase) domain 1 417 608 - -
Pumo5g01811 609 ProSiteProfiles Protein kinase domain profile. 341 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01811 609 Gene3D Ribonuclease Inhibitor 8 179 IPR032675 -
Pumo5g01811 609 SUPERFAMILY Protein kinase-like (PK-like) 345 591 IPR011009 -
Pumo5g01811 609 Pfam Leucine rich repeat 87 145 IPR001611 GO:0005515
Pumo5g01811 609 Pfam Protein kinase domain 345 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01811 609 Gene3D Ribonuclease Inhibitor 180 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01811 Pumo-Chr5 50388816 50391109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01811 36 598 Receptor kinase-like Gene Family AT1G68400 34.360 1.38e-91 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo5g01811 Pkinase 1.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01811 - - gmx:100813796 1074.31