Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01807 ATGGCCGGAGAAGCAAGACGCATCGACGACAATAAGCAACGCGCAGAGATTGCGATCGAAGCATTCCATGCCGTGGAGCGTGACATCGTGGTGGTTTGCTCCGCCGGGAATGCCGGACCAAGTTCGTACACGGTTCGGGGATGGCGCCGGAGGCTAAATGAGGTTATGGGAGAGGTCGAAGTGGCGGAGGCGGTGCAGGCGGCGAACGTGGTGGGCAAGAGGGTGGCGTTGAGGTTGTTGTTGGCGAGGAAGAGAGAGGAGGGGGAGGGGAAGTGGCAGAGAGCGGTGGCGGGGACAGTGCCGGAGAGTTGGAGTTTGGCCCCGAAGGAGGAAGAGACTTGGCTAATTCGGTGCAGTGGACGTAGGATAAGAGTGTGA 378 0.6005 MAGEARRIDDNKQRAEIAIEAFHAVERDIVVVCSAGNAGPSSYTVRGWRRRLNEVMGEVEVAEAVQAANVVGKRVALRLLLARKREEGEGKWQRAVAGTVPESWSLAPKEEETWLIRCSGRRIRV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01807 125 Gene3D Peptidase S8/S53 domain 13 46 IPR036852 GO:0004252|GO:0006508
Pumo5g01807 125 SUPERFAMILY Subtilisin-like 15 47 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01807 Pumo-Chr5 50152858 50153348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01807 10 45 Subtilisin-like Serine Gene Family AT1G20150 58.333 1.64e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01807 - K25898 gmx:100820194 48.521