Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01806 ATGGCACACCTCAACCTGCCATTCATAGTCACTTTCCTTTCTATCTTTTTTGTATGTCTTGCACCAGTTGAGCCATCTTTGGCTCTGCATAACCCCCAAAACCGAAACCAGACAATGGCTTACATAGAGTCCTCATGCCGAGGAACCCGGTATCCTGATCTGTGCATACGTTGCCTAGCCGGATTCGCCGATTCCACCATAGACGGCCCTCAACACCTAGCTCATGTTGCCCTTTCGGTGAGCCTCTCCAGGGCCCTAAAAACAAGGGGATACTTGTTAAAAGTGGCCAAGGAACTTAAGGAATTCAAGAATATTGATAGGGTGTACCTTACTGTGCAAGATTGTGTGACGCAAATCAATGACAGTGTTGACCAACTTTGCCAAGCCATCAAAGAGCTCCGCAGGCTGAACAAACACACCACCATAGATGACAACTTCTTGTGGCACATAAGCAACGTCGAGACATGGATGAGCACTGCCTTAACAGATGCTAGCTATTGTGTTCAATCGTTCCCTGGCCATAGGATGAGTAAGAGGACTGCTACTATAAAGGTTAAGGCGCAAAATGTTGCTGAACTCACCAGTAATGCGCTGAACTTATTTCATAGATATGCTTCTAAGTACCGGGCAGCAGCTAGAGCCACCAAGAAACCCTAA 657 0.4673 MAHLNLPFIVTFLSIFFVCLAPVEPSLALHNPQNRNQTMAYIESSCRGTRYPDLCIRCLAGFADSTIDGPQHLAHVALSVSLSRALKTRGYLLKVAKELKEFKNIDRVYLTVQDCVTQINDSVDQLCQAIKELRRLNKHTTIDDNFLWHISNVETWMSTALTDASYCVQSFPGHRMSKRTATIKVKAQNVAELTSNALNLFHRYASKYRAAARATKKP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01806 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 204 IPR035513 -
Pumo5g01806 218 NCBIfam pectinesterase inhibitor domain 11 203 IPR006501 GO:0004857
Pumo5g01806 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 200 - -
Pumo5g01806 218 FunFam Pectinesterase inhibitor 3 37 205 - -
Pumo5g01806 218 CDD PMEI-like_3 44 206 - -
Pumo5g01806 218 Pfam Plant invertase/pectin methylesterase inhibitor 41 200 IPR006501 GO:0004857
Pumo5g01806 218 SMART PMEI_2 37 200 IPR006501 GO:0004857
Pumo5g01806 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01806 Pumo-Chr5 50146726 50147382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01806 42 201 Carbohydrate Esterase AT3G49220 28.049 3.62e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01806 - - gmx:100807870 268.47