Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01799 ATGGCAGGTCGAGGGCAGTGGAGGAATTGTTACAAGGAAGTGGCTCCATTTTGTGCATTGGTTACAGTGCAGTTTACTGAGGTTGGGGTCAACATTCTATTCAAGGAAGCCACTATGAAAGGATTGAGCTACTATGTCTTCATCCTCTATTCATTTGCTCTTTCCACTCTTATTCTGCTTCTCCCTTTGCCCTTCATCTTCCGCAGGTCAACAGGACTTCCATCGTTGAATTCGTCTATTCTTTGCAAAATTTTCTTCCTGGGATTGCTTACATTTTCAGCTCAGCTTTGTGGATATAAAGGCATTGACTTCAGCTCACCAACTCTTGCTTCTGCTATGGCCAATCTGCTTCCAGCTTTTACCTTCATACTTGCGGTCTTTTTCAGGATGGAAAATGCAGATTTAAGTAGCTCAAGCACACAAGCCAAAATCATGGGTTCAATAGCATCCATAGCAGGTGCACTCATAGTTGTGCTCTATAAAGGACCTACAATCTTAAAAGCTGCATCTCCATCACAAGCTCCTCCACTTGCATCTTCACAAAGGAATTGGGTTCTAGGCGGCTTTCTACTTGCCATTGCATATATTCTAATGTCAATATGGTATATCGTGCTGACCCATATTATCAAATTGTATCCAGCAGAGCTGATTGTGACCTTCTTATGCAACTTGTGCGCGACTATCATAGCCACCCCAGTATGTTTTTTAGGAGAAGAAAACTTGAGTAATTGGAGACTAAGACCTGATATAACACTGGTGGCTATTTTATACTCAGCATCCTTTAGCACATTCTTCAGCACTGTTGTTCACACATGGAGCCTCCATCTGAAAGGTCCTGTATATGTATCAATCTTTAAGCCCCTGTCAATTGCCATAGCTGCTGCTATGAGTGTTATATTCCTTGGTGAAGCTTTGTATCTTGGAAGGTATGAATTAAAACTTATTCTCTCTCTTCATTTTAAATCCCTTTTCTTGTCTGTAGATAGAACTCTACTATTTCTTTGA 1005 0.41 MAGRGQWRNCYKEVAPFCALVTVQFTEVGVNILFKEATMKGLSYYVFILYSFALSTLILLLPLPFIFRRSTGLPSLNSSILCKIFFLGLLTFSAQLCGYKGIDFSSPTLASAMANLLPAFTFILAVFFRMENADLSSSSTQAKIMGSIASIAGALIVVLYKGPTILKAASPSQAPPLASSQRNWVLGGFLLAIAYILMSIWYIVLTHIIKLYPAELIVTFLCNLCATIIATPVCFLGEENLSNWRLRPDITLVAILYSASFSTFFSTVVHTWSLHLKGPVYVSIFKPLSIAIAAAMSVIFLGEALYLGRYELKLILSLHFKSLFLSVDRTLLFL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01799 334 PANTHER WAT1-RELATED PROTEIN 16 312 IPR030184 GO:0016020|GO:0022857
Pumo5g01799 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 308 - -
Pumo5g01799 334 Pfam EamA-like transporter family 28 158 IPR000620 GO:0016020
Pumo5g01799 334 Pfam EamA-like transporter family 187 307 IPR000620 GO:0016020
Pumo5g01799 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01799 Pumo-Chr5 49851368 49855325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01799 7 329 Nodulin-like Gene Family AT5G40240 53.030 3.19e-116 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01799 - - cave:132182283 384.415