Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01798 ATGGCAGGAAGGTATTGTCACAAGGAAGTGCTTCCATTCACCGCAATGGTTGCAATAGAGTGCACCAACGTTGGTGTCAACGTTCTATTCAAAGCAGCAACCGAGAAGGGATTGAGTTATTATGCCTTCATCGCTTACTCATTTGCAGTCTCTACCCTCTTTCTCCTTTTGCCTCTGCCCTTCGTCTTTCGATGGTCAAGAGGGCTTCCTCCGCTCAATTTCTCTCTCATCTTCAGAATTTTCCTCCTTGGAGTAATTGGACTTACAGCGCAGCTTTGTGGATATAAAGGACTTAAATACACTTCGCCCACTCTTGCTTCTGCTCTTAGCAACCTTATACCGGCTTTCACCTTCATATTAGCAATCATTTTCAGAATGGAAAAGGTAGCTTTGAGAAGCTCAAGCACTAAGGCCAAAATCTTGGGATCGTTGGTATCCATATCAGGTGCACTCATAGTTGTTCTCTATAAAGGCCCCATAATCTTATCAACTTCTTCTCCACTACCTTCACCTACAACTGATTCTCCAATGGGCTCTACATCTCAATCAAATTGGGTTCTAGGTGGATCTCTACTCGCCATTGAGTTTATTTTGGTTCCAATCTGGTACATTGTTCAGACCAATATTATGAAACAATACCCAGCAGAGTTTATTGTGGTCTTCTTATACAACTTGAGCGGGACTCTCATATCTACACCAATTTGCTTGCTATTAGAAGCAAATCTGAGTTCTTGGAAGATAAATCGTGATATAACATTGATCGCTATTATATATTCGGGCTTCTTTTGCACGGGCCTAAGCAGTTTGGTTCACACTTGGGGCCTCCATCTTAAAGGCCCGGTTTATATTTCAATCTTTAAGCCTTTGTCCATAGCCATTGCTGCTGCTTTGAGTATTATGTTCCTCGGTGATGCACTATATTTTGGAACCGTTGTTGGAGCAGTGATACTCTCATTAGGGTTTTATGCTGTCATATGGGGGAAAGCTAAAGAAGAAGAATTGAGTGTGGACTTTGATATACGTCCTCCATCAAATACTAAGAGTCCTTTGTTGCAGAGCTACAAAGTGAAAGATAACGAAGAGATCATGTACAATGATTCTTGA 1104 0.4158 MAGRYCHKEVLPFTAMVAIECTNVGVNVLFKAATEKGLSYYAFIAYSFAVSTLFLLLPLPFVFRWSRGLPPLNFSLIFRIFLLGVIGLTAQLCGYKGLKYTSPTLASALSNLIPAFTFILAIIFRMEKVALRSSSTKAKILGSLVSISGALIVVLYKGPIILSTSSPLPSPTTDSPMGSTSQSNWVLGGSLLAIEFILVPIWYIVQTNIMKQYPAEFIVVFLYNLSGTLISTPICLLLEANLSSWKINRDITLIAIIYSGFFCTGLSSLVHTWGLHLKGPVYISIFKPLSIAIAAALSIMFLGDALYFGTVVGAVILSLGFYAVIWGKAKEEELSVDFDIRPPSNTKSPLLQSYKVKDNEEIMYNDS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01798 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 330 - -
Pumo5g01798 367 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0016020|GO:0022857
Pumo5g01798 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Pumo5g01798 367 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Pumo5g01798 367 Pfam EamA-like transporter family 198 325 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01798 Pumo-Chr5 49841780 49850690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01798 1 359 Nodulin-like Gene Family AT5G40240 55.249 2.65e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01798 - - gmx:100805667 628.246