Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01784 ATGAAGGCCGTGCCCCTACCCTTCCAGGAATTTAGAGGGAACGGGGTGTTAGATTTTGCTTCTGGTGCTGTTGCTGCTGTTTCAGATTCGTTATTATTCCCACAGCAAGAGCAATTTCTGCAAAGGTGGAACCCCCACAGGGAAAACTGTTGCTATGTGGGCATTGAGCCCACTTCTGGTTTGGACCTCAAAAGGAAAACAAGCAGCCCTCCCACCACATCCTCCTCTACACTGTCTTCCTCACGCAGCGGCGGCGGCGGAGGCTGCGGCTCCACCGATAGCACCACCGGCGCGGCCACGGCCACGGCGGCTGAGAAGGAGAACAACCCTCCTCAAGCAGGGTTAGAGGTTGGACAGGCAAGATGTGGGCTGGGAATGGAGGATTGGGAGAGTGTGTTGTCTGAGTCACCAGGCCAAGATCATTCCATTCTGAAATTGATTATGGGGGACATTGAGGACCCATCTGTGGGTTTGACCAAGCTTTTGCAGGGTGGAAGTGCCTCTCAGGATGTTGAATTCAACGGCGTTGGAGTGGGTTTTAGTTTGGTGGATCAAAGTTCTGTGCTTGACCCCATTCCTAGTGTCAACTTTGTGAGCACCAGCATTGACCCTTCTGGTCCTGGGAATTGTTCTGATTTCCCTTTCAATTCCCACAGTAATGTTAGCTCCAATATTCCCAGAGTTGGTTCTGGTGTGAATCCAAACCCTGGGTTCCCTGCTTCAGCTAGCAATCTCTCACCAGTTTCACTCCCTCAGGGTGTGTTTCAGCCACAACAACAACAGCAGCATCAACCAATAGAGCCTCTGGATGAGAAGCTACAAGCTCTCAATCCCCAGTTCATTTTGAACCAAAATCAATCTCAGTTTATGCCAAACCCAGGTTTGGTTGTGCCTTTGACATATGCCCAACTGCAAGAACATCATCAGCTTCTCCCTCAGCCTCCGGCAAAACGCCTGAATTGTGGCCCAAATTATCAGGTTCCAAAGACACCCTTTTTGGACTCTGGCCAAGAGCTGTTACTTCGGAGGCAGCAACAGCAGCTTCAACTGCTTCCTCACCATCTGCTGCAGAGGCCATCCATGGTGGTGGCACCAAAGCAGAAAATGGTGAACCCCGGCGGCGAAGACTTGGCAACCCACCCGCTTCAACAGGTTATAACTGAACAGCTTTTCAAAGCTGCAGAGCAGATCGATGCCGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCCATTGGGAAGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTACTTCTCCATCCAAATGCCAACAATAGTTCTTTCACCTTCTCACCTACTGGCCTTTTGCTCAAGATTGGTGCTTACAAATCATTCTCAGAAATCTCACCAGTTCTGCAGTTTGCCAATTTCACTTGTAACCAAGCGCTGCTTGAAGCTGTGGAAGGGTTTGATCGCATTCACATCATAGATTTTGATATTGGGTTTGGTGGACAGTGGTCTTCTTTCATGCAAGAGTTAGCACTCAGGAATGGTGGTGCACCTGAACTCAAGATCACTGCATTTGTGTCACACTCCCACCATGATGAAATTGAGCTCAGTTTCACTCAGGAGAATTTGAAGCAATATGCTGGGGAGATTAACATGTCCTTTGAGCTCGAGATTCTGAGCCTTGAGTCTTTAAATTCTGCTTCCTGGCCCCAGCCTCTTCGTGACTGTGAAGCTGTGGTGGTTAACATGCCTATTGCCGCTTTCTCAAATTACCCATCACATCTACCTTTGGTCCTTCGCTTTGTGAAGCAGCTCATGCCAAAAATTGTGGTTACATTGGATAGAAGTTGTGATCGAACTGATGCACAATTTCCTCAGCATCTGATTTTTGCACTTCAGTCTTATTCGGGGCTGCTTGAGTCACTTGATGCCGTTAATGTTCACCCAGATGTCCTTCAGATGATTGAGAAGTATTATCTTCAGCCAGCAATGGAGAAGCTTGTTTTGGGTCGACATGGTTTGCAGGAAAGAACACTTCCTTGGAAAAATCTTCTCTTGTCATCTGGGTTTTCACCATTGACATTTAGTAACTTTACAGAATCCCAGGCAGAGTGTTTGGTGCAGAGAACTCCTGGCAAGGGATTCCATGTTGAGAAGAGGCAGTCTTCCCTTGTTCTTTGCTGGCAAAGGAAGGATCTCATATCAGTTTCAACTTGGAGATGCTGA 2232 0.4812 MKAVPLPFQEFRGNGVLDFASGAVAAVSDSLLFPQQEQFLQRWNPHRENCCYVGIEPTSGLDLKRKTSSPPTTSSSTLSSSRSGGGGGCGSTDSTTGAATATAAEKENNPPQAGLEVGQARCGLGMEDWESVLSESPGQDHSILKLIMGDIEDPSVGLTKLLQGGSASQDVEFNGVGVGFSLVDQSSVLDPIPSVNFVSTSIDPSGPGNCSDFPFNSHSNVSSNIPRVGSGVNPNPGFPASASNLSPVSLPQGVFQPQQQQQHQPIEPLDEKLQALNPQFILNQNQSQFMPNPGLVVPLTYAQLQEHHQLLPQPPAKRLNCGPNYQVPKTPFLDSGQELLLRRQQQQLQLLPHHLLQRPSMVVAPKQKMVNPGGEDLATHPLQQVITEQLFKAAEQIDAGNLELAHGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHPNANNSSFTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPELKITAFVSHSHHDEIELSFTQENLKQYAGEINMSFELEILSLESLNSASWPQPLRDCEAVVVNMPIAAFSNYPSHLPLVLRFVKQLMPKIVVTLDRSCDRTDAQFPQHLIFALQSYSGLLESLDAVNVHPDVLQMIEKYYLQPAMEKLVLGRHGLQERTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRTPGKGFHVEKRQSSLVLCWQRKDLISVSTWRC 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01784 743 MobiDBLite consensus disorder prediction 61 116 - -
Pumo5g01784 743 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 352 738 IPR005202 -
Pumo5g01784 743 MobiDBLite consensus disorder prediction 62 107 - -
Pumo5g01784 743 Pfam GRAS domain family 387 742 IPR005202 -
Pumo5g01784 743 ProSiteProfiles GRAS family profile. 377 742 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01784 Pumo-Chr5 49317754 49321141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01784 354 743 GRAS Transcription Factor Family AT4G00150 57.506 8.44e-142 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo5g01784 GRAS 3.3e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01784 - - gmx:100805945 1249.57