Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01775 ATGAATACGCAAAAGCAAAGGTGTATAAAGGAAAGGGACACTCACAAGAGATATTTTGCAACTAGCTCTGCTTCATCCAAAATGGTGCCACTTGTGTGCATACTCATATCTCTTCCTGTGTTGGTATTGATCCTCTTCAACAAACACAGAGCCAAAAAGAACCCATCACCAACCCGTCGTCCACCAGGCCCAAGAGGCCTTCCCATCATTGGCAATCTTCACCAAATCAACAGTTCGAAGCTCAATTTCCAACTGGGGCAGCTCTCGAAGACCTATGGTCCCCTTTTCTCCCTCCAACTTGGCTTCAAGGAAGCCATCGTTGTTTCCTCTCCGAAACTAGCCAAAGAGGTCCTCAAAGACCATGACCTCGACGTGTGCACCAGGCCTCCCTCGCTTGGCCCTCTGAGACTGACCTACAACGGGTTGGAGCTGATTTTCTCGCCCTACAACGACTACTGGAGAGAAATCAGGAAAATCTGCGTGGTCCACTTCTTCAGCTCCAAACGGATCTCCAGCTTCTCCCACGTGAGAAAATCAGAGGTCAAGCTACTGATCGAGATCGTGTCCGGCCACGCTCGTGCTTCCAAGACGACCAACTTGAGCGAGGTTTTGATGTCGGCCTCGAGCGGTGTTATATGTAGGGTCGCTTTCGGGAGGAAGTACGATGAGGAGGGAGCCGAGAGGAGCAGGTTCCATGGGCTGCTTAACGACTCACAGGCTATGTTGCTATCCTTTTTCGTTTCGGATTACATTCCGTTCTTGGGGTGGGTTGATAGACTCACCGGGCTCTTTGCTCGTCTTGAAAGGACTTTCAAGGCCTTGGATTTGTTTTTCCAAGAAGTCGTTGACGAGCACCTTGATCCCAATAGGGTGAAACAGAATGAAGAGGAGGATAAGGATATTGTTGATGTGTTGCTTGAGCTGAAGAAGCAGGGTCGCTTGTCAATAGACCTCACCAATGATCAAATCAAAGCTATCATCTTGGACATACTCGTAGCAGGAACTGATACAACTGCAGCCACATCAGTGTGGGTGATGACTGGATTGATAAAGAACCCAAGAGCAATGGCCAAAGCCCAAGAAGAAATTAGAAACCTGTGTGGCAACAAAGACTTCATAGAGGAAGAGGATGTTCAAAAGCTTGAATATCTGAAGGCGGTGATAAAAGAGACACTGAGGCTTTATGCACCAACACCACTAGTACCAAGAGAAGCCATTAGAAGTTTCACAATAGAAGGGTACGAAATACAGCCCAAGACAATAGTGTATGTGAATGGCTGGTCCATCCAGAGGGACCCTGAGGCTTGGAAAGACCCAGAAGAATTTTACCCAGAGAGATTCTTAAACAATGAGATAGATTTTAAGGGACAAGATTTTGAGCTGATTCCGTTCGGTGCAGGGCGTAGAATTTGCCCAGGAATATCACTGGGAATGGCCATAGTGGAGCTCATAATTGCAAACCTTCTTAATTCGTTCCATTGGGAAATGCCTGCTGGGATGAAACCTGAACACATCGACACTGAGGGGCTTCCAGGACTTGCCCGCCACAAGAAGGATCATCTTTTCCTTGTTGCCAAGAAACGTATGTGA 1590 0.4748 MNTQKQRCIKERDTHKRYFATSSASSKMVPLVCILISLPVLVLILFNKHRAKKNPSPTRRPPGPRGLPIIGNLHQINSSKLNFQLGQLSKTYGPLFSLQLGFKEAIVVSSPKLAKEVLKDHDLDVCTRPPSLGPLRLTYNGLELIFSPYNDYWREIRKICVVHFFSSKRISSFSHVRKSEVKLLIEIVSGHARASKTTNLSEVLMSASSGVICRVAFGRKYDEEGAERSRFHGLLNDSQAMLLSFFVSDYIPFLGWVDRLTGLFARLERTFKALDLFFQEVVDEHLDPNRVKQNEEEDKDIVDVLLELKKQGRLSIDLTNDQIKAIILDILVAGTDTTAATSVWVMTGLIKNPRAMAKAQEEIRNLCGNKDFIEEEDVQKLEYLKAVIKETLRLYAPTPLVPREAIRSFTIEGYEIQPKTIVYVNGWSIQRDPEAWKDPEEFYPERFLNNEIDFKGQDFELIPFGAGRRICPGISLGMAIVELIIANLLNSFHWEMPAGMKPEHIDTEGLPGLARHKKDHLFLVAKKRM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01775 529 Gene3D Cytochrome P450 45 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 CDD CYP71-like 91 521 - -
Pumo5g01775 529 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 113 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 PANTHER CYTOCHROME P450 71B11-RELATED 42 526 - -
Pumo5g01775 529 SUPERFAMILY Cytochrome P450 61 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Pumo5g01775 529 Coils Coil 356 376 - -
Pumo5g01775 529 Pfam Cytochrome P450 61 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01775 529 FunFam Cytochrome P450 83B1 46 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01775 Pumo-Chr5 49019117 49023161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01775 31 529 Cytochrome P450 AT4G31500 47.913 3.14e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01775 - - gmx:100806470 838.95