Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01736 ATGGAGAATGAACAAAAATGGAAAATATATAAATCCTTACCGGATGAGTTTTGTGACACTTATGGCCTCTGCGGACCCTACGGGAATTGCGTAAGTACTCAATCACAAGTCTGCCAATGTTTAAAAGGATTCAGTCCAAAGTTGCCACGAGAATGGAACTCATCAGATTGGACTCAAGGATGTGTCCGCAATAAACCATTAAGCTGCAAAGAAAAACTCACAGATGATGGGTTTGTCAAATTCCAAGGGCTGAAAGTTCCAGATACTACACATACTTGGATGGGTGAGAGTATTGGTCTAGAAGAATGCAGAGTGAAGTGCTTGAATAATTGTTCTTGTATGGCTTATACTAATTCAGACATAAGAGGTGCAGGTCGTGGTTGTGTCATGTGGTTTGGAGATCTCATTGACTTGAAACAGTTTCAAACTGGTGGGCAAGATCTATATATCAGGATGCCTGCATCAGAGTTAGTGGTTCCTTCCAACCCTCAAGAACCTAGCCACAAGAAGAACACGCGAACGTTAACGATAGTTGCTTCCACCATTGCTTCAATTTGTGGGGTTCTGCTACTAAGTTCCTATTTTATCTGCAGAAGTCGGAGGAACAATGCTGCCACAAGTTATTGGAAGAACAAGAGTAAGAAGGATGACATTGATTTACCAACATTTGATTTTTCATCAATATCTAATGCCACAAATCACTTTTCGCAAAGAAACAAATTAGGACAAGGTGGCTTTGGACCAGTGTACAAGGGCATATTACCAGATGGACAAGAGATTGCAGTTAAGAGGCTTTCTAAAACTTCTAGACAAGGATTGGATGAGTTTAGAAATGAAGTCATGTTGATTGCAAAACTTCAACACCGTAATCTTGTAACACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATTTATGAATTCATGCCCAACAGAAGCTTGGACTATTTTATTTTTGATTCAACAAAACATACATTATTAGGATGGGCTAAGAGATTTGAAATTATTGGTGGAATTGCTCGAGGACTTCTCTATCTTCACCAAGACTCTAAACTAAAGATCATTCACAGGGATCTCAAAACCAGTAATGTTCTTCTTGATAGTAATATGAACCCGAAAATATCAGATTTTGGTATGGCTAGGACATTTGGGCTAGATCAAGATGAAGCAAATACAAATAGAATAATGGGAACATATGGTTATATGTCTCCTGAATATGCTGTACATGGATCTTTTTCAGTCAAATCTGATGTTTATAGCTTTGGTGTGATTGTGTTGGAGATAATTAGTGGAAGGAAGATTAAGGAATTTATTGACCCACACCATCACCTAAATCTTCTTGGACATGTAGGTCTAAAAAATATCAGTCTTTATATGAATCATAACACTTCGACCCATGAAACAATGTACATTTTAGTAGTTTTTAATATGAAAAATGAACTCAATGATTTGTGGCCTTCCCATCATTTTCAGGCATGGAGCCTATGGAGTCAAAAAAAGCCAAAGGAGTTTATGGATGACTTAGTGGACAATCCTGTCGATCCATCTAAAATACTAAGGCATATTCATATTGGTTTGTTATGTGTACAACAGAGACCAGAGGATAGGCCAAACATGTCATCAATAGTTTTAATGTTGAATGGTGAAAAGTTATTGCCCGAGCCAAGCCAACCTGGGTTCTACACAGGAAATGAGCATCCATCCATGGTAGATAGTCCTCTAAGAAATTGTGAAGCATTTTCCCTCAATGAAATGTCTAACTCATTATTGGAGGCAAGATAA 1788 0.3786 MENEQKWKIYKSLPDEFCDTYGLCGPYGNCVSTQSQVCQCLKGFSPKLPREWNSSDWTQGCVRNKPLSCKEKLTDDGFVKFQGLKVPDTTHTWMGESIGLEECRVKCLNNCSCMAYTNSDIRGAGRGCVMWFGDLIDLKQFQTGGQDLYIRMPASELVVPSNPQEPSHKKNTRTLTIVASTIASICGVLLLSSYFICRSRRNNAATSYWKNKSKKDDIDLPTFDFSSISNATNHFSQRNKLGQGGFGPVYKGILPDGQEIAVKRLSKTSRQGLDEFRNEVMLIAKLQHRNLVTLLGCSIQQDEKLLIYEFMPNRSLDYFIFDSTKHTLLGWAKRFEIIGGIARGLLYLHQDSKLKIIHRDLKTSNVLLDSNMNPKISDFGMARTFGLDQDEANTNRIMGTYGYMSPEYAVHGSFSVKSDVYSFGVIVLEIISGRKIKEFIDPHHHLNLLGHVGLKNISLYMNHNTSTHETMYILVVFNMKNELNDLWPSHHFQAWSLWSQKKPKEFMDDLVDNPVDPSKILRHIHIGLLCVQQRPEDRPNMSSIVLMLNGEKLLPEPSQPGFYTGNEHPSMVDSPLRNCEAFSLNEMSNSLLEAR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01736 595 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 568 - -
Pumo5g01736 595 Gene3D Transferase(Phosphotransferase) domain 1 311 554 - -
Pumo5g01736 595 CDD STKc_IRAK 241 550 - -
Pumo5g01736 595 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 200 310 - -
Pumo5g01736 595 SMART serkin_6 235 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01736 595 Pfam S-locus glycoprotein domain 2 47 IPR000858 GO:0048544
Pumo5g01736 595 Pfam Protein kinase domain 236 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01736 595 ProSiteProfiles Protein kinase domain profile. 235 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01736 595 Gene3D Phosphorylase Kinase; domain 1 196 310 - -
Pumo5g01736 595 Pfam PAN-like domain 74 138 IPR003609 -
Pumo5g01736 595 SUPERFAMILY Protein kinase-like (PK-like) 221 564 IPR011009 -
Pumo5g01736 595 CDD PAN_AP_plant 66 153 - -
Pumo5g01736 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Pumo5g01736 595 ProSiteProfiles PAN/Apple domain profile. 69 153 IPR003609 -
Pumo5g01736 595 SMART ntp_6 73 152 IPR003609 -
Pumo5g01736 595 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 68 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01736 Pumo-Chr5 47153976 47156880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01736 188 573 Receptor kinase-like Gene Family AT3G45860 50.380 5.60e-123 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo5g01736 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01736 - - gmx:100801916 846.654