Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01711 ATGCAGCTGAATCGCTTATGCATAATTTTACCACCAAATTCTGGTGAAATGGTGGTGCCACTTGAAAAGGGTGTCAAAGAAGAACCCTTTCAAACACCAAAGAAACAACAAGTTGAGGCCAAAAAGCCTCAAAGGGCTTGTGGGGGACAAGTTATTGCTTTGCTTCGTGATTCTTTGGGCAAGTTATATGACTCAGGGTGGTGGAGAGTTTGCCAAAAGGGAGAGCACAAAGAGAAGAACAACTCTGGTGTGTTGTTTCATGACATGGAAGGTGTGCAAGTTTCTGTCAACATTGGCAGGGACAACCCCAGAATTTTCAGCTATGCAGAGTTGTTCATAGGGTCCAATGGTTTCAGTGAAGACCAAGTTCTAGGGAGTGGAGGGTTTGGCAGAGTCTACAAAGCTGTTTTGCCAAGTGATGGAACTGAGGTTGCTGTGAAGTGCTGTCTGGCAGAGAAAGGGAAGCAATTTGAGAAGAGTTTTGCAGCAGAGTTAACAGCTGTGGCTGATCTTCGCCACAAGAATCTTGCATGA 534 0.4513 MQLNRLCIILPPNSGEMVVPLEKGVKEEPFQTPKKQQVEAKKPQRACGGQVIALLRDSLGKLYDSGWWRVCQKGEHKEKNNSGVLFHDMEGVQVSVNIGRDNPRIFSYAELFIGSNGFSEDQVLGSGGFGRVYKAVLPSDGTEVAVKCCLAEKGKQFEKSFAAELTAVADLRHKNLA 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01711 177 Gene3D Phosphorylase Kinase; domain 1 89 177 - -
Pumo5g01711 177 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Pumo5g01711 177 SUPERFAMILY Protein kinase-like (PK-like) 103 176 IPR011009 -
Pumo5g01711 177 Pfam Protein kinase domain 119 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01711 177 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 176 - -
Pumo5g01711 177 ProSiteProfiles Protein kinase domain profile. 118 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01711 Pumo-Chr5 46025279 46026354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01711 103 176 Receptor kinase-like Gene Family AT1G15530 47.297 3.36e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo5g01711 Pkinase 4.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01711 - - gmx:100796108 332.413