Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01708 ATGTCCTTCAATCAGTCAAAGTCCGATAAGAGCGACTCCGTGTACCGAAAATCCGGGCGATCCGGCAGCTTCAGTCAGCAGCGAGGTTCCTCCGGCGGTGCGTACGGCAAGGGCGGCGGCGGCGGTGGCGGCGCCGGGCCTTCTCCGTCGCTCTCCTCTAGCCGGAGTTTTAACAAGAAGTCTAATAATAATGCGCAAGGAGGGCAATCTAGGGTAAACCCTACACTGGTGAATTCGACCGAGTCTAATAGTACTTATGCAGTCCGGACTGTTCCAAATGGTTCCCATGTACAGCCACAGATTCATGGAGGATCTGATGCACCAGTTACAAATGCAACTGCCAAGCCATCTGAATCGTCGGCTGCACAGAGGAGCACCAGAGCTGTTCCAAAAGCTCCTACTTCTCAACCTCCCCCCATGAATTCTGATCCAGCAGCTCCTACAACCCCTGCTAAGGATGCATCTAAGGCATTCCCTTTCCAATTTGGATCTATTAGTCCTGGCTTTATGAATGGGATGGCAATTCCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGATGAGCAGAGGCGTGATCAAGCTCGACATGATTCTTTTAGACCTGCACCCTCAAGGCCAACACCTCCTGTTCCAAAGCAGCAGGCAGCGAGGAAGGATACAGGTGTTGCTGACCAATCTAACGCTGGGGAGACTCATACTGGGACTAGGGCAAAAATGGATACTCAAGGGTCACCATTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTCATTTCTTTATCTGGAATGTCAATGCCAATGCCATATCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCTCAGATTCCGTCTCAAGGTATGTCATCGGCACCTCTTCAGATGCCATTACCAATGCCTTTACCGATCGGAAGTGCTGCACAAGTGCAACAACAGGTTTTTGTTCCAAACCTTCAACCTCATCCTATCCATCCTCAGGGAATCATGCATCAAGGCCAAAGCATGGGTTTCACTCCTCAAATTGCCCCTCAGTTGTCCCATCAGTTAGGCAACATGGGTATGGGAATTAGCGCACAATATCCACCACAGCAAGGAGGAAACTTTGCTGCTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCTGAGACACATGAAGAGCTAAGACTTGATAAAAGGACAGATGCATATTCAGATGGTGGGTCATCTGGTGCAAGGCCTCATTCTGGCATGCCTTCTCAATCTCAGCCTGCCCAGCAATTTGCAGCTTCCCATTCTATTAATTACTATCCATCCAGTTCCTACAGTACCAATTCTCTCTTTTATCCAACTCCTAGTTCTCTTCCATTAACAAGTAGCCAGATAACTCCTAACTCTCAGCCACCCAGATTTAATTATGCAGTGAACCATGGTCCGCAAAATGTTAGTTTTGTAAATTCATCATCTCATAGTTCCCTGCCTGTTAATAAAGCTGGCACTTCTATTCCTGGCAATGCTGAACCGCCTAATCCAGAATTTTCCCGGGATGTGCATAATACAGTCTTGTCAGCTCCATCAGGTGTAACTTCTGTGTCCATTAAGCCTAGTGGTGGATCTGGTGTTGTGGACTCATCATTTTCCAATTCCAGTACTCAAAAGAGTGGATCTCCTAGTTCTTCATTAACATCTGGTGATGCTTTCTCTTCTGTACCACTAAAAGGGTCTGAAACAACTGAAATCTCTTCACAACAGTCTAAGGTGTCCAGTGATTCATCAGTTTTGAGTTCATTGCCAAATCTATCTGCTGCATCTACTGTGAAGCCTACATCAGCTTCCTTGTTGCTTTCTACATCTGCTGTGAGTGAAGATTCTGTTTCAGTTCTGCCTAATAATGAAGGCAGAAAGAAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGAAAATACAGAAGAAAGGCCAATCACAGCATCAGGTTGCTGTGCAATCTCCTTCTGTGGCTAATGTGCCTTCCAAAGCTGTTGATGGTGATATCCCTGATGGTGAAGTTTCTGAAACTGCAGGAACTAAAACAAACCATTCTGCAGCAATTACCAGTGAAGATCTCTCAGCTGCAGCTTCAGACACGTTATCAGCTACCAGTGAGAGCATAACTTATGCTGTTGAAATGAAAACTAATGATTCTACACAAGTTTCTGCTTGTGCTTCAGCTGAAGGACCTGTTACACAAGTGGTGGATAATTTGAACAATCATAAGAATGCCGAGCTAGATGAATTGTCTCAACAGGATAAACCATTACAGCCAAATATTTTGGAAATGGGTGATAAAACAGAAAATTTGTCTCTTCAAGGAAGTAAACAAAGTGTTAGTGATGGTGGAACAGAATTAAAACAACCTGAGCAAGGTGCCACAAAGTTAAGTACTGAGGTTGTAACCTTGAGGACTGCGCAGCAAGGGCAGGATGAATCTACCAGTTGTAGTGCAGAATGTGACAGGATGGCTGATAATAAGGGCATGCCTATCTCTGCCACAATGGATTCTAAAGATGTTTCTTTAAATAGAAATGATAGTGTGGTTAGTAATGAAGCTGTTTCTTCAAATTCTGGCACATCAGATCAGCAGTCTGCTGATCTCCTAGAAACAACTTCAAAACAGTGCAAGGATGATAGTTCAGAGAATGCTGGAAGTGGTTCAGTGTCTTTTCCAGCATCAGGTACCAAGGACAGACCAATTTCAGAGCCTAGTAAGGTGAAACCTACATCAAAGGGGAAAAAGAAACTTAAAGAGATTCTTCAGAAGGCTGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATATAAGGGACCTGAGGAAAAGAAAGAAACTGTTATAAGTTCAGAGAAAGCAGAAAGTGATTCTACTTCTGGAAATTTAGAGCAGTTGCCAACTGATGCTGCTCAGCCAGATGCTGTAGCAAACGAGCAATCAAAGCAGAGTAAAGCTGAACTTGATGATTGGGAGGATGCTGCTGACATGTCTACACCAAAACTAGAAGTTTCAGATGAAACTGAACAGGTTAGTGATGGAAGTGCAATTACTGCCAAAAAGTACTCTCGGGATTTCCTTTTGAAATTTGCAGAGCAATGCACTGATCTTCCTGAAGGGTTTGAAATCACGGCAGACATAGCTGAGGCTTTGATGAGTGCTAATGTTAGTTCTCATGTAATTGAACGTGATTCACATTCTTCTACTGGAAGAATTATCGATAGGTCAGGTGGGATGTCTCGTCGTGGGAGTGGTGTTATTGTGGAAGACAAATGGAGTAAAGTTTCTAATGCATTTCATTCCGGTATGCGTTTGGATGGTGTTGGAGGTAATGCAGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAGACACCTCTGCAGTATGCTGGAGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGGTGGCAGCGTGCTACTAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCTTCTACTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTACGAGGTGGGTAAAGTGACAGATGAGGAACAGGCAAAGCAGAGGCAATTGAAGGGTATATTAAACAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGATCAGGTTAAAGCAGTTAATATTGACAATGTAGTCACTCTCAATGGTGTCATCTCGCAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTCTCATCTGGCAGCTGCTTTGCCTGATCTCAGTCAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAGAGGGGCGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAGGGTGAGGTCAAGCTGTCTAATGAGGAAAGAGAAGTGAAACGAACCAAGGCAAGAAGACGTATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAGAAGAGAATGTTGACAGAAAGAATAATGCATGAATGCATCAAGAAGTTATTGGGTCAGTATCAGGATCCGGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGACGCATATTTCGAAATGATGAGATCATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAGCAAAGAAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTTCTCAAGAGAGGCTGGCCCAAGCTAGTAGGCTGGGTCGTGGTCCAGGCAACAATCCACCTAGAAGAATCCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTCATCTCCTAATGCTCAGATGGGTGGACTGCGTGGATTGCCTACTCAAGTTCGCGGTTATGGTTCTCAGGATGCTCGCATGGATGATAGGCAAACTTATGAGGCTAGGATGTTGTCAGTTCCCTTGCCTCAAAGACCTTTAGGTGATGAGTCAATAACCTTGGGACCACAGGGTGGTCTTGCCAGAGGAATGTCCATTAGAGGTCCACCTGCCATTTCAAGTTCAACTGGTCTTAATGGTTATAATAATTTGTCGGAGCGCACTTCATACAGCTCTAGGGAGGACCCTGCATCAAGATATACTCCAGATAGATTTGCTGGTTCGACTGCTTACGATCAATCTAGTGTTCAAGATCGTAATATGAATTATGGCAACAGGGACTTGAGAAGTGCAAACAGGATTCTTGATAAACCTGTTGTAACTTCACCACCTGCCAGAACGCAAGGGACAGCAGTCGCCCAGAATATTTCTCCAGAGCGCCTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTTAATGAAGTTGTTCTATGCATCAAAGATCTGAACTCCCCAAGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCATTCGAGAGAAAGGATGCCGAGAGAGATCTTTTGGCCCCGCTGCTTGTCAAGCTAGTGAAATCTCAGGATGGACCCTTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATGCGGTTAATGATGCCCCCAGAGCACCAGAGTTTCTTGGCCGCATTTTTGCTAAAGCTATAACAGAGCATGTAATCTCTTTGAACGAGATTGGGCGGTTGATACACGAGGGTGGAGAGGAACCGGGAAGCCTCTTAGAAGGTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAGGGCGACGCTGTTTTGAGCGAGATCTGCGTGAGCTCCAACTTGCTGTTGGAGACCTTCCGGCCGCCGGAACCTCTTAAATCAAGGAAGTTAGAGAAATTTATTTTAGGGGGATAG 5532 0.4449 MSFNQSKSDKSDSVYRKSGRSGSFSQQRGSSGGAYGKGGGGGGGAGPSPSLSSSRSFNKKSNNNAQGGQSRVNPTLVNSTESNSTYAVRTVPNGSHVQPQIHGGSDAPVTNATAKPSESSAAQRSTRAVPKAPTSQPPPMNSDPAAPTTPAKDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQRRDQARHDSFRPAPSRPTPPVPKQQAARKDTGVADQSNAGETHTGTRAKMDTQGSPLPPASQMQKPSVISLSGMSMPMPYHQSQASVHFGGPNPQIPSQGMSSAPLQMPLPMPLPIGSAAQVQQQVFVPNLQPHPIHPQGIMHQGQSMGFTPQIAPQLSHQLGNMGMGISAQYPPQQGGNFAAPRKTTPVKITHPETHEELRLDKRTDAYSDGGSSGARPHSGMPSQSQPAQQFAASHSINYYPSSSYSTNSLFYPTPSSLPLTSSQITPNSQPPRFNYAVNHGPQNVSFVNSSSHSSLPVNKAGTSIPGNAEPPNPEFSRDVHNTVLSAPSGVTSVSIKPSGGSGVVDSSFSNSSTQKSGSPSSSLTSGDAFSSVPLKGSETTEISSQQSKVSSDSSVLSSLPNLSAASTVKPTSASLLLSTSAVSEDSVSVLPNNEGRKKESLSRSNSLKDNQKKIQKKGQSQHQVAVQSPSVANVPSKAVDGDIPDGEVSETAGTKTNHSAAITSEDLSAAASDTLSATSESITYAVEMKTNDSTQVSACASAEGPVTQVVDNLNNHKNAELDELSQQDKPLQPNILEMGDKTENLSLQGSKQSVSDGGTELKQPEQGATKLSTEVVTLRTAQQGQDESTSCSAECDRMADNKGMPISATMDSKDVSLNRNDSVVSNEAVSSNSGTSDQQSADLLETTSKQCKDDSSENAGSGSVSFPASGTKDRPISEPSKVKPTSKGKKKLKEILQKADAAGSTSDLYNAYKGPEEKKETVISSEKAESDSTSGNLEQLPTDAAQPDAVANEQSKQSKAELDDWEDAADMSTPKLEVSDETEQVSDGSAITAKKYSRDFLLKFAEQCTDLPEGFEITADIAEALMSANVSSHVIERDSHSSTGRIIDRSGGMSRRGSGVIVEDKWSKVSNAFHSGMRLDGVGGNAGFRPGQGGNFGVLRNPRTQTPLQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRATSFQQRGLIPSPSTPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFDQVKAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCSHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEEREVKRTKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFEMMRSLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERLAQASRLGRGPGNNPPRRIPMDFGPRGSSMSSPNAQMGGLRGLPTQVRGYGSQDARMDDRQTYEARMLSVPLPQRPLGDESITLGPQGGLARGMSIRGPPAISSSTGLNGYNNLSERTSYSSREDPASRYTPDRFAGSTAYDQSSVQDRNMNYGNRDLRSANRILDKPVVTSPPARTQGTAVAQNISPERLQDMSMAAIREYYSARDVNEVVLCIKDLNSPSFHPSMVSLWVTDSFERKDAERDLLAPLLVKLVKSQDGPLGQAQLIKGFESVLSTLEDAVNDAPRAPEFLGRIFAKAITEHVISLNEIGRLIHEGGEEPGSLLEGGLAADVLGSTLEVIKMEKGDAVLSEICVSSNLLLETFRPPEPLKSRKLEKFILGG 1843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01708 1843 FunFam Eukaryotic translation initiation factor 4G 1216 1451 - -
Pumo5g01708 1843 Pfam MA3 domain 1659 1766 IPR003891 -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 1443 1502 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 886 903 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 219 254 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 629 649 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 451 494 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 844 879 - -
Pumo5g01708 1843 Coils Coil 1298 1338 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 1443 1462 - -
Pumo5g01708 1843 SMART ma3_7 1653 1767 IPR003891 -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 451 589 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 990 1015 - -
Pumo5g01708 1843 Gene3D - 1644 1841 - -
Pumo5g01708 1843 SUPERFAMILY ARM repeat 1647 1837 IPR016024 -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 380 398 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 650 667 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 1 254 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 1561 1588 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 409 424 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 754 1017 - -
Pumo5g01708 1843 SMART if4_15 1216 1438 IPR003890 GO:0003723|GO:0005515
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 47 131 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 511 589 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 909 930 - -
Pumo5g01708 1843 ProSiteProfiles MI domain profile. 1652 1776 IPR003891 -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 945 959 - -
Pumo5g01708 1843 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 355 1840 IPR045208 GO:0003743
Pumo5g01708 1843 SUPERFAMILY ARM repeat 1210 1440 IPR016024 -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 1559 1612 - -
Pumo5g01708 1843 FunFam Eukaryotic translation initiation factor 4G 1646 1839 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 772 828 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 960 974 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 17 32 - -
Pumo5g01708 1843 Gene3D - 1216 1451 - -
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 375 424 - -
Pumo5g01708 1843 Pfam MIF4G domain 1216 1438 IPR003890 GO:0003723|GO:0005515
Pumo5g01708 1843 MobiDBLite consensus disorder prediction 616 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01708 Pumo-Chr5 45969982 45979675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01708 1 1839 Eukaryotic Initiation Factors Gene Family AT3G60240 45.253 0.0 1305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01708 K03260 - gmx:100796636 3105.08