Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01687 ATGGGAACATATCGTTGGATGGCACCAAAGGTGGTTAAGGAAAAAACTTGTACTCATAAAGTTGATGTGTACAGTTTTGATATTATGCTTTGGGGGCTCACAATTGTTGTACTTCCCTTCAAAGGAATGACCCCAATGCAAGCTACTTTTTCTATGGCTGAGAAGCAGCCACAAGAGGCCCTTGTTGTCGCTCCAGATCTTAATACTGCTGGCAGTTCATTATGTGTTGGTGGTGGCAACTTAATGATGAATAATAATAATAACACATCCATCATGTCTCTATGTGCTGAAGACACTAAGCCAACCTTATTTCTAACTACTTATTTACTGTCTTTTGACAAATCCGCTGCATTGTTACCAACTGATCGTGATTCTTCCCAATTGCTCAAAGAAACTTTGCCTTTGTCCTCATCAAGGGCCAACCATAGAACCAAGAAGGCTCGAAGTGCTTCTAAGTCACTGGATCACATCATGTCATAG 480 0.4083 MGTYRWMAPKVVKEKTCTHKVDVYSFDIMLWGLTIVVLPFKGMTPMQATFSMAEKQPQEALVVAPDLNTAGSSLCVGGGNLMMNNNNNTSIMSLCAEDTKPTLFLTTYLLSFDKSAALLPTDRDSSQLLKETLPLSSSRANHRTKKARSASKSLDHIMS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01687 159 MobiDBLite consensus disorder prediction 137 159 - -
Pumo5g01687 159 Pfam Protein tyrosine and serine/threonine kinase 4 56 IPR001245 GO:0004672|GO:0006468
Pumo5g01687 159 SUPERFAMILY Protein kinase-like (PK-like) 1 56 IPR011009 -
Pumo5g01687 159 Gene3D Transferase(Phosphotransferase) domain 1 1 74 - -
Pumo5g01687 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01687 Pumo-Chr5 45075156 45075864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01687 1 61 MAP Kinase Kinase Kinase AT1G62400 63.934 2.35e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo5g01687 PK_Tyr_Ser-Thr 1.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01687 - - pvy:116110973 91.2781