Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01660 ATGGATTTTGTGGTAGTGGATTCGGACAAGGGAAATGAAGCAGAACATAGCTGTCTAGAAGAGAGTACAAGTATATTTGAAGAAGTTGAAGTTCAAGAGCCATATGTGGGCATGGAATTTGACTCTGAAGAAGCTGCTAGGAAGTTTTATGTTGATTATGCCAGACGGGTAGGATTTGTTGTACGCATAATGCAACGGCGACGTTCTGGAATCGATGGGAGGACTCTTGCTCGCCGACTTGGATGTAACAAACAAGGATTCTCACCAAATAACAAGGGAACATTAGGACCAGAGAAAAAGCCAAGACCGAGCGCCCGAGAAGGTTGCAAGGCAACAATTTTGGTGAAGTTGGAAAAATCAGGAAAATGGGTTGTCACAAGATTTGAAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGGTTCAGCACAGCGGGTGATAAAGATAAGAAAATTGCAGAACTTACCATGGAGTTAGAGCGCCAAGATCAACTATGTGCTGCATATCGAGAAAAACTGCTCAGCTTCATGAGCAATGTTGAGGAGGAAACAGAGGAACTGTCCACAAAAATTCAACTCATTATTGAAAATGTAAGGAGAGCTGAGTCAGAAATGAAAAAATGTTCACAGAACAGAAAGCCTTGGTGCTTATCCTGA 660 0.4212 MDFVVVDSDKGNEAEHSCLEESTSIFEEVEVQEPYVGMEFDSEEAARKFYVDYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGTLGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFEKDHNHPLIATANGFSTAGDKDKKIAELTMELERQDQLCAAYREKLLSFMSNVEEETEELSTKIQLIIENVRRAESEMKKCSQNRKPWCLS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01660 219 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Pumo5g01660 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 201 - -
Pumo5g01660 219 Coils Coil 153 173 - -
Pumo5g01660 219 MobiDBLite consensus disorder prediction 82 107 - -
Pumo5g01660 219 Coils Coil 178 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01660 Pumo-Chr5 43594156 43598901 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo5g01660 FAR1 2.6e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01660 - - vun:114183030 401.364