LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g01615	ATGCACACCCACCTGTGTCTCTTATTGGTGTTATGTTTCCCTGTTTTCTTAAACGCCGTACCCCCCGACAAAGGTGGTAGCCACTCCTTGATGTTGGGGTGTGGGTTGGGCGAAGGTGGTGGCAAAGATAGCGACGGAAGACAATGGAGCCCCGACAACAAGTACCTCTCACTCTCAGGGGGCAATTCCGTCACATCCCAAGCCTCTTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCGTACATGACATCACGTGTTTTCACCTCCGAAGCAACCTACAACTTCCCCGTTCAACCCGACAAACGTTACTGGCTCAGGCTCCATTTCTACCCCGCCGTTTACAACACCTTCGACCCCGTCAATTCATATTTCTCCGTCACAGCAAACGGCGTTACGCTTCTTTCCAACTTCAGTGCCTCAATCACGTGCCAAGCCCTCTCACAAGCCTACCTCGACAGAGAGTATTCCCTCGCGCCTTTGGATTCGGACACTCTCACCCTTACCTTCAAGCCCTCCGAGAAACATAACGGAGCTTTCGCTTTTGTTAATGGGATTCAGCTTATTGAAATGCCGGAGTTGTTCGATTCGGCTCCTTTGGTGGGGTACTCTGACCAAACCATGGATACAAAAAGTTTGCATTTTCAGACAATGTTCAGATTAAACGTTGGTGGGCAATTTATATCTCCGAAACAAGATTCTGGTCTAAGCAGAATGTGGTACGATGATACACCTTATTTATATGGTGCTGCCACTGGTGTCACCAACCAAGCTACCAAGGATGTCAAAATTGACTACAAAACCATGCCACAGTACATTGCTCCTACTAATGTGTATGCCACTTCAAGATCCATGGGGAACAATAAGGACGTCAACATGGGGTTCAATCTCACGTGGATTTTCCAAGTTGATCCAGGTTCCATGTACCTTACAAGATTGCATTTCTGTGACTATTACTATGCCAAAGTGAATGAAATTGTTTTCAAAATCTACATCAACAATCAAACGGCGGAGGCTGAAGCTGACGTGATTGGGTGGACAGGAGGTAAAGGAGTGCCAACTTATAAGGATTATGTAATATATGTGAAAGATGAGCCAGGTGATGATCAACTATGGCTTGGTTTGCACCCTGCACCTGAAACAAAGCCAGAATTTTATGATTCATTACTCAATGGGGTGGAGGTGTTCAAGCTCAATGACACAGACTTGTCTGGCCCTAACCCTCAACCTTCTGAGATGTTGATTGAACATGAGGTGCAAGCAAAGACTTTCCAAAACAAACATGGTAGTAATAAGACTTTTGTTATTGGCAGTGCTGCTGGGGGTGCTGCAGGTTTTGGCTTAGCGGCTGCAATAATTGTTGTTGTTCAGCACCAAAAAAAGAAGAGAGCTCCGGGATCATACAGCACATCAAGCTGGCTACCTATTTATGGGAATTCGCACACCGCAGGCACCAAATCCTCAGGGTCAGGGAAGAGTGTTGGTAGTGCCAACTTATCAGCCATGGCTCAAGGACTGTGCCGCTATTTCTCCTTACAAGAGATGAAGCAAGCGACCAAGAGTTTCGATGAGTCCAATGTGATAGGGGTAGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATTGATAATGGGTTCAAAGTGGCAATCAAAAGATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTCCAGACTGAGATTGAGATGTTGTCCAAGTTGAGACACAAGCATTTGGTGTCTTTGATTGGTTTTTGCGAGGAGGATGATGAGATGTGTCTGGTTTATGACTACATGGCTCATGGCACCATGAGGGAGCACCTCTACAAGGGAAACAAGCCATTGGACACACTATCATGGAAGCAAAGGTTGGAGATCTGCATTGGAGCCGCAAGAGGCCTTCACTACCTTCACACGGGGGCAAAATACACCATCATTCATAGAGATGTCAAAACAACCAACATTCTCCTTGATGAAAATTGGGTTGCAAAGGTTTCAGATTTTGGACTGTCCAAAACGGGTCCAAACATGAACCAGGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACTTGGATCCCGAATATTTCAGGAGGCAACAGTTGACTGAGAAATCTGATGTGTACTCATTTGGGGTTGTTCTGTTTGAGGCACTTTGTTCAAGGCCTGCTCTTAATCCTAGCCTTCCAAAGGAACAGGTAAGCCTTGCAGAATGGGCATTGTACAACAAAAGAAGAGGAACACTTGAGGACATCATTGACCCCAACATCAAAGGACAGATCAACCCTGAAAGCTTGAACAAGTTTGCTGATGCGGCTGAGAAGTGTGTGTCTGATCTTGGATTCGAGCGCCCCTCCATGAATGATCTCTTGTGGAATCTCGAATTTGCTCTCAATGTGCAACAAAACCCCAATGGTTCAACTGCTCCACATCTTGATGAAAGTGAGTTTGAAGAAGTAAGCTTAGAAAAGAATGACATGGCAGCTCACTACAAAAACCTTAGCCTTGGAAGTGAGCATGAGCTTAGCCACGATTCCAGTAGTGATAACTCTGCTGCCATCTTCTCACAAATTGTCGATCCAAAAGGACGATGA	2592	0.4579	MHTHLCLLLVLCFPVFLNAVPPDKGGSHSLMLGCGLGEGGGKDSDGRQWSPDNKYLSLSGGNSVTSQASFQDPSLLSEVPYMTSRVFTSEATYNFPVQPDKRYWLRLHFYPAVYNTFDPVNSYFSVTANGVTLLSNFSASITCQALSQAYLDREYSLAPLDSDTLTLTFKPSEKHNGAFAFVNGIQLIEMPELFDSAPLVGYSDQTMDTKSLHFQTMFRLNVGGQFISPKQDSGLSRMWYDDTPYLYGAATGVTNQATKDVKIDYKTMPQYIAPTNVYATSRSMGNNKDVNMGFNLTWIFQVDPGSMYLTRLHFCDYYYAKVNEIVFKIYINNQTAEAEADVIGWTGGKGVPTYKDYVIYVKDEPGDDQLWLGLHPAPETKPEFYDSLLNGVEVFKLNDTDLSGPNPQPSEMLIEHEVQAKTFQNKHGSNKTFVIGSAAGGAAGFGLAAAIIVVVQHQKKKRAPGSYSTSSWLPIYGNSHTAGTKSSGSGKSVGSANLSAMAQGLCRYFSLQEMKQATKSFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMAHGTMREHLYKGNKPLDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPSLPKEQVSLAEWALYNKRRGTLEDIIDPNIKGQINPESLNKFADAAEKCVSDLGFERPSMNDLLWNLEFALNVQQNPNGSTAPHLDESEFEEVSLEKNDMAAHYKNLSLGSEHELSHDSSSDNSAAIFSQIVDPKGR	863

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g01615	863	FunFam	FERONIA receptor-like kinase	212	398	-	-
	Pumo5g01615	863	ProSiteProfiles	Protein kinase domain profile.	521	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo5g01615	863	Gene3D	-	32	191	-	-
	Pumo5g01615	863	Gene3D	-	212	396	-	-
	Pumo5g01615	863	SMART	serkin_6	521	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo5g01615	863	Pfam	Protein tyrosine and serine/threonine kinase	525	721	IPR001245	GO:0004672\|GO:0006468
	Pumo5g01615	863	ProSitePatterns	Protein kinases ATP-binding region signature.	527	549	IPR017441	GO:0005524
	Pumo5g01615	863	FunFam	receptor-like protein kinase FERONIA	484	596	-	-
	Pumo5g01615	863	PANTHER	OS07G0166700 PROTEIN	505	800	IPR045272	GO:0004714\|GO:0006468
	Pumo5g01615	863	Pfam	Malectin-like domain	33	396	IPR024788	-
	Pumo5g01615	863	Gene3D	Phosphorylase Kinase; domain 1	483	596	-	-
	Pumo5g01615	863	MobiDBLite	consensus disorder prediction	839	863	-	-
	Pumo5g01615	863	Gene3D	Transferase(Phosphotransferase) domain 1	597	813	-	-
	Pumo5g01615	863	FunFam	FERONIA receptor-like kinase	29	191	-	-
	Pumo5g01615	863	CDD	STKc_IRAK	527	794	-	-
	Pumo5g01615	863	SUPERFAMILY	Protein kinase-like (PK-like)	498	796	IPR011009	-
	Pumo5g01615	863	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Pumo5g01615	863	FunFam	Receptor-like protein kinase FERONIA	597	810	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g01615	Pumo-Chr5	42578163	42580754	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g01615	23	863	Receptor kinase-like Gene Family	AT3G51550	53.425	0.0	872

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pumo5g01615		Malectin_like	1.5e-35	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g01615	-		-	gmx:100791236	1550.03