Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01604 ATGTTGTATGTTTTCTCACTCCTTTCTCCTATGCACCCTGCCACTGCCCTTCTCCTCAAACCTATTTTCCTTCATGCCTTATCCTTCTCCCTCCACCTTCTATTGCTTGTGGCAGTGTCGCTGTCATGGCTATGGAACAAAATCACATTCACAGTGGGACCCAGAGAAGAAAACTCTAAGGAGAAAGAGAAAGCCAGTGACACTAACACCCTCTTCAAAACGACCGTGTTTTGTTCTCTCGCTCTTTCTGCTTTCAGCCTCGTCCTCTGTTTGTTGAATTACTTCTACTGGTACACAAGCGGCTGGTCAGAGCAAAAACTCACGACCCTTTTGGATTTGGCGCTCAAAACACTCGCTTGGGGCGTTGTTTCTGTTTCTTTGCACAAAGGGTTCTCGTTCTTCTTCAGTTCAGGTGAAGAAAGAAGGTTCAGGTTCTCATTCTCATTCCTCTTCAGAGCTTGGTGCACCTTCTACCTCATTTTTTCTTGCTATTCCTTCGTGGTGGAGATTGTTGTTCTCTCCGAGACACCAACACAGTACTTGGTTTCTGACGTTGTATCCACTTGTGCGGGGTTGTTCTTCTGTTACGTGGCGTATTTTGTGAAAAACAAGGGTCACGTTAACGGTATTGAGGAACCTCTTTTGAATGGTGAAGCAAAAGAGGCCAAGGGTGGTGACACTGTTACCCCTTTCTCACATGCTGGAGTTTTCAGCATTCTCACTTTCTCTTGGATGGGTCCTCTTGTGGCTGTTGGCAACAAGAAAACCTTGGACCTTGAGGATGTTCCTCAACTTGACACCAGAGATAGTGTGGTTGGTGCTTTTCCAACTTTCAGGGATAAACTTGAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAGACAGTTGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTTCTGACCTTATATTGGTCATGAAAGATGGGAGAATTACTCAACGTGGAAAGTATAATGATCTGCTTAATAGTGGTACTGATTTTATGGAACTTGTTGGCGCACACAAAAAAGCTTTGTCTACACTAGATTCATTGGATGGAGTGACAACATCTAATGAAATAAGTACCTTGGAACAAGATGCAAATGTCTCTAGCACGCATGGTTTTAAAGTAAAAGAGGCAAGCAATGAGGAGCAAAATGGTAAAATAAACAACAAAAGTGAACCAAAAGGTCAGCTTGTTCAAGAAGAAGAAAGAGAGAAAGGTCAAGTTGGGTTTTCAGTCTATTGGAACTATATCACAACGGCGTATGGAGGAGCTCTGGTACCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTTTTCAAATTGGAAGCAATTATTGGATGGCTTGGGCGACTCCCATCTCAACAGAAGTGGAGCCACCTGTTGGAGGAACGACTCTTATAGTAGTTTATGTTGGTCTGGCTGTTGGAAGTTCTTTCTGCGTCTTTGTCAGAGCAATGCTTCTTGTCATAGCTGGTTACAAGACAGCCACAACACTATTCAATAAAATGCATTTATGCATTTTCCGTGCTCCAATGTCGTTTTTCGATTCCACTCCAAGTGGGCGAGTCCTTAACAGAGCTTCATCTGACCAAAGTGTAGTGGACACAAATATTCCTTATCAAACTGGGTACTTTGCCTTCTCTATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCAGTGATAGCAGTTAGCATCTGGTATCAGCAATATTATATACCATCAGCCCGAGAACTATCACGTTTAGTTGGAGTTTGCAAAGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGAAACAAATATGAACTGACTGATGGGTATTGTCGGCCACAGTTCAATATTGCTGGTGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCTATCACATTTGTCTTTTCCTTAATATTCTTAATATCTATTCCACCAGGAATCATAGATCCAGGCATTGCTGGTTTAGCTGTTACATATGGACTTAATTTGAACATGGCACAAGCTTACGTGATATGGGATCTCTGCAACTTGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAATATACTAGTATTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAAATCGGCCAGATCCTTCTTGGCCCTCATATGGCGAGGTTGATATACAAGATTTGCAGGTAGTTCGTTATGCTCCACATCTTCCACTTGTGTTGCGTGGTCTTACATGCAAGTTTCATGGAGGACTAAAAACTGGCATTGTTGGGAGAACAGGAAGTGGAAAATCCACTCTCATTCAAACACTTTTCCGAATTGTTGAGCCTACTTCTGGGCAAGTTATGATTGACAGCATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACAGTGAGAAATAATCTGGACCCCCTGGAAGAATACACTGATGAACAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAACTCGACTCTGCAGTTAGTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTCTGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTCCTTGACGAAGCCACTGCATCAGTCGACACAGCTATGGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCTCTGACTCTACAGTCATTACCATTGCGCATCGAATAACTTCGGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAACTTTGCTAGAGAATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATGCCATGAGGTCCAACTCCAGTTTTGAGAAATCTGATTGA 2949 0.4235 MLYVFSLLSPMHPATALLLKPIFLHALSFSLHLLLLVAVSLSWLWNKITFTVGPREENSKEKEKASDTNTLFKTTVFCSLALSAFSLVLCLLNYFYWYTSGWSEQKLTTLLDLALKTLAWGVVSVSLHKGFSFFFSSGEERRFRFSFSFLFRAWCTFYLIFSCYSFVVEIVVLSETPTQYLVSDVVSTCAGLFFCYVAYFVKNKGHVNGIEEPLLNGEAKEAKGGDTVTPFSHAGVFSILTFSWMGPLVAVGNKKTLDLEDVPQLDTRDSVVGAFPTFRDKLEECLLGLLSSKTVVYVTHQVEFLPASDLILVMKDGRITQRGKYNDLLNSGTDFMELVGAHKKALSTLDSLDGVTTSNEISTLEQDANVSSTHGFKVKEASNEEQNGKINNKSEPKGQLVQEEEREKGQVGFSVYWNYITTAYGGALVPFILLAQILFQAFQIGSNYWMAWATPISTEVEPPVGGTTLIVVYVGLAVGSSFCVFVRAMLLVIAGYKTATTLFNKMHLCIFRAPMSFFDSTPSGRVLNRASSDQSVVDTNIPYQTGYFAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGNKYELTDGYCRPQFNIAGAMEWLCFRLDMLSSITFVFSLIFLISIPPGIIDPGIAGLAVTYGLNLNMAQAYVIWDLCNLENKIISVERILQYTSIPSEPPLVVEENRPDPSWPSYGEVDIQDLQVVRYAPHLPLVLRGLTCKFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPTSGQVMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTAMDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTTLLENKSSSFAQLVAEYAMRSNSSFEKSD 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01604 982 FunFam ABC transporter C family member 5 392 714 - -
Pumo5g01604 982 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 282 969 - -
Pumo5g01604 982 SUPERFAMILY ABC transporter transmembrane region 429 715 IPR036640 GO:0005524|GO:0016020
Pumo5g01604 982 Pfam ABC transporter 752 899 IPR003439 GO:0005524
Pumo5g01604 982 Gene3D ABC transporter type 1, transmembrane domain 391 714 IPR036640 GO:0005524|GO:0016020
Pumo5g01604 982 FunFam ABC transporter C family member 3 716 969 - -
Pumo5g01604 982 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 431 617 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo5g01604 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 727 964 IPR027417 -
Pumo5g01604 982 Gene3D - 275 342 IPR027417 -
Pumo5g01604 982 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 735 968 IPR003439 GO:0005524
Pumo5g01604 982 CDD ABCC_MRP_domain2 731 952 - -
Pumo5g01604 982 MobiDBLite consensus disorder prediction 380 403 - -
Pumo5g01604 982 Pfam ABC transporter transmembrane region 432 615 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo5g01604 982 CDD ABC_6TM_ABCC_D2 429 708 IPR044726 GO:0140359
Pumo5g01604 982 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 282 340 IPR027417 -
Pumo5g01604 982 SMART AAA_5 760 953 IPR003593 GO:0016887
Pumo5g01604 982 Gene3D - 716 970 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01604 Pumo-Chr5 42317842 42323764 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01604 717 967 Calmodulin-binding Proteins AT2G36910 28.854 4.31e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01604 - K05666 gmx:100794567 1211.82