Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01576 ATGTCTCTTTCAATACTCTTAGAGGGTAACCCAAACACCAACACTACTCTTCAGCAGTTGGTGATCAAAGAAGGAACACCCTCTTCTTCACGGAACTCTTTCCCTACACATAAGACAGGCAAACTCGAAGATAGCGATGAAGATGTGTTCACGGTTCCAGATATGGAAGCTGCACCAAGTGTTGATTCTGCAGCAACAAATCCAAGTAGTAGAAACGTGACAGATCCACAGCTTGAAGCTGGCTTCCATGGAAAGCGCCGCCGCGGAAGAAACCCCGTAGACAAGGAGCATAGACGCCTCAAGAGGTTGTTAAGGAACAGGGTTTCAGCCCAACAAGCCCGTGAAAGAAAAAAGGTTTATGTAAATGACTTGGAATCAAGAGCTAAAGAATTGGAAGACAAAAATACCAAGTTAGAAGAGCGTATTTCTACTTTGATCAATGAGAACGCCATGCTCCGCAAGGTTCTTATGAACACGAGGCCCAAAGTTGATGAGAGCAATGAAACATACTGA 513 0.4444 MSLSILLEGNPNTNTTLQQLVIKEGTPSSSRNSFPTHKTGKLEDSDEDVFTVPDMEAAPSVDSAATNPSSRNVTDPQLEAGFHGKRRRGRNPVDKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDKNTKLEERISTLINENAMLRKVLMNTRPKVDESNETY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01576 170 CDD bZIP_HY5-like 108 150 - -
Pumo5g01576 170 SMART brlzneu 94 158 IPR004827 GO:0003700|GO:0006355
Pumo5g01576 170 Gene3D Single helix bin 117 158 - -
Pumo5g01576 170 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 24 166 IPR044280 GO:0000981|GO:0045944
Pumo5g01576 170 MobiDBLite consensus disorder prediction 24 98 - -
Pumo5g01576 170 SUPERFAMILY Leucine zipper domain 98 157 IPR046347 GO:0003700|GO:0006355
Pumo5g01576 170 Pfam bZIP transcription factor 95 154 IPR004827 GO:0003700|GO:0006355
Pumo5g01576 170 MobiDBLite consensus disorder prediction 62 76 - -
Pumo5g01576 170 FunFam Transcription factor HY5 117 158 - -
Pumo5g01576 170 Coils Coil 114 155 - -
Pumo5g01576 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 101 116 IPR004827 GO:0003700|GO:0006355
Pumo5g01576 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 96 159 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01576 Pumo-Chr5 41221419 41224251 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01576 73 165 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 71.134 6.75e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo5g01576 bZIP_1 4.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01576 K16241 - gmx:778143 203.756