Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01559 ATGGGTAAGATTGAACTAGTAGAGAAAGTTGTAGTTGCTCCTGAGCAACCTACACCTCGCAAGAGAATGTTCTTGTCAAATATTGACCTGTCCCTTGTTATTTACCAAGACTCTGCCTCCTTTTTTGATCCTCCAAGCACCCAAATGAGCTTTGGTGAGATTTGTAGCAAATTGTACAGTGCACTTAGTAAAATGCTTGTGCAGTATGACTTCATGGCTGGCAGGCTAGTGCCAAGTTTGGAGGAGACTCATCGATTTGAAATAGACTGTAATGGTGCTGGCATTGTCGTCGCGGCTGCAAGAACTGACAGAAAATTGAGTGAATTTGGTTTGATTTCTGCACCTAATCCAGAGTTGAGGGAGTTAGTTGCTTTCTTGCATGAAGAGGGTGATCAAGAAAATGACCTGAAAGAAAAGCCCCTTGCATCGTTACAGCTGACTCAGTTTGGTTGTGGAAGTTTGGCACTTGCTTCTCGCTACAACCACTGCACACTGGACGGTTTCGCAATCAGAGATTTTGAGGTAAATTTAGGTGCATTAACACGCGGTGAAGACCTCATCATAGTGCCTAATGCAGATAGAACACTGCTGAGAGCTCGAAACCCTCCAAAGATAAGTCATCCACATTTTGAGTATTCAAAATCCACTGACACACACAACCTGTTCACTCTCCGAGGCAAAAGTGGCACCAGTGCCACACAACCCGTGCCACAAAATCAGATTCACGTGCTCCATTTGTCACCACAAAAAATAGCCACCTTCAAAAAGAAGGCCCTGAAGGACAACAACAACAACACCACCTTAAAGAACACCACAACTTTTCAGGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAACAAGGATGGCAGAGGAAAAAGTGTCCACAATGCTGTTCCCAGTGGATGTTAGGAAAAGGGTTGTTCCTGAACTCCCAGATGGGTTTGCAGGCAATGCATTGGTGCCTGGTTTTGCAAGAGCAACAGTGAGGGACCTAATTGAGCTAGAGGATGCTTGTCACATAAGGAAAGTGCAAGAAGGGGTTGAGAGATTGGATGATGAGTACATCAAGTCAGGGTTGGATTGGTTAGAGGTGAACAAAGGGGCACCTTGTATGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGACTAGGGCTAGAGGAGCAACTTTTTGCATGGGGGAGACTAAAGTGTGCCACCACACTTGCAGTTAAGCCTGGTTTGGTCATGCTCTTGCCAGGGCCACATGATCAAGGGGGTCTTAACATATGCCTGGATTTACCTGAGGATCAAATGCAAGAGTTTAGTAGGATAATGCTAGAAGTTTAA 1335 0.4502 MGKIELVEKVVVAPEQPTPRKRMFLSNIDLSLVIYQDSASFFDPPSTQMSFGEICSKLYSALSKMLVQYDFMAGRLVPSLEETHRFEIDCNGAGIVVAAARTDRKLSEFGLISAPNPELRELVAFLHEEGDQENDLKEKPLASLQLTQFGCGSLALASRYNHCTLDGFAIRDFEVNLGALTRGEDLIIVPNADRTLLRARNPPKISHPHFEYSKSTDTHNLFTLRGKSGTSATQPVPQNQIHVLHLSPQKIATFKKKALKDNNNNTTLKNTTTFQVVAAKIWKARSIATRMAEEKVSTMLFPVDVRKRVVPELPDGFAGNALVPGFARATVRDLIELEDACHIRKVQEGVERLDDEYIKSGLDWLEVNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATTLAVKPGLVMLLPGPHDQGGLNICLDLPEDQMQEFSRIMLEV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01559 444 Pfam Transferase family 3 438 - -
Pumo5g01559 444 Gene3D - 223 442 IPR023213 -
Pumo5g01559 444 Gene3D - 2 214 IPR023213 -
Pumo5g01559 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01559 Pumo-Chr5 40644387 40646679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01559 3 444 Monolignol Biosynthesis Gene Families AT5G48930 28.540 7.07e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01559 K15400 - gmx:100801822 799.275