Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01534 ATGGCTATGGCTGTGGATGCTGTTGTTGGAAAAGTGCTTGGTGAACTGCTGAAGGAAGTTGTGGAAATGAAAGACAGGGCTGTGAAGTTCAGACCCACCCTGGAAAGCTTGGAGTCCACCCTCAAAAAAGTAGAACGATTGGCTAAGCAGATAGATGGACTTAACAATCTATTGGATAAACCAGCTGAGGAAACGAAAGAGCTGATCGATCAGTTGGAGAAGGGGAAGAAGCTCGTTAAGGAGTGCTCCAATGTCCAGTGGTGGAATTGCTGTCATAAGGCTGACTACCAACCGGAACTTCAAGCCTTGAATGACTTGATTTTTAAGTACTTCAATTTGGATATGCAAGGTCAGATACGCAGGGATGTGTTGGAGAACCAGGTGATGCTGAGGGAGCTTTGTGTGGAATATAGAAATAATATTCCGGGAATGACTCAAATAAGCGGCGTGTGTTCGCCTCCTGGACCCCCGTCTTTCACTGTTGGGTTGGATGTTCCTTTGAGCTGGTTGAAGTCGATGGCGCTGAAGGACCATGATGGTGGCTTAGTGCTCACGGTGACCGGACCTGGAGGTTCTGGGAAGTCAACGTTGACTAAAATGTTTTGTTGGGATCAAGAGGTCAAAGGTAAATTCAAGGAAAACATATTCTTCATAGCCTTTGCGAAAACGCCCAAGTTCGATACCATATTACAGAGACTGTTTCAACACAATGGTTTCCAGATGCCAGAGCTTCAAAATGAGGATGATAAGGTTAACCAATTGGAAAATTTGCTAAGACAAATAGGAAAAAGCCCAACATTATTGGTTCTTGATGATGTTTCTTCCAAATCAATATCTCTTATTCACAAATTTGTGTTCTCAATCCCAAACTACACGATTTTAGTGACATCAAGAGTCACAATTAGCGATTTTGGCCATCCTCCATATGCCTTGAAACCCCTTGGCGATGTGGATGCTAGAAATCTACTTTGCTACTTTGCATCACCCCCGAATCAGAGCAGCTCTGATGATGTCGAAAAGATAGCGAGATGGTGCAGGGGTTCTCCCTTGGCACTTATAGTGACTGGCAGATCACTAAATTGTCAATCATCGGAGGATTGGCATGACAAAGCGGAGGAATTGTCCACGGGTCATTCAATTGTTGCTTCCAGTGAAGATGTGCTTACTTGTCTGCAAAAAAGCTTCGATGATTTGGATGCTAAGGTGGCTGAGTGTTTTAGGGACCTAAGCTTATTTCCTGAAGCCCAGAGGATCCCCGTAGCAGCCCTTGTTGATATGTGGGCAGAACTGTGTGATGAAGATGATGGCAATGCAAAGAAGAATATCAAAGAACTGGTCATCCGGAACATGGCTGATAGGGATACTTCTGACACAAGGAATATTACTAGTGACACAATCGACTACAATTACCGCTATGTTACACAACATGGTCTTCTACGGGACCTAGCTATCTTTCAAACAAGCCAGAAGCCACCGGAGAAGAGGAATAGACTAATTATTGATATAAGTGGTAATAATCTTCCCGAATGGTGGACTACACGGAAGAAGTATCACATTGCAGCCCGCACACTGTCCATATCAACTGATGAAGCATTTACTTCAGAATGGTGCAACTTGCAGCCAACTGAGGTTGAGGTTCTAGTGCTGAACCTTCGAGAAAAGAAGCGCTCGCTACCAATGTTCATGAAGAAAATGAATAAACTAAAAGTCCTAATAATAACGAATTATGACCTCTATCATGCCGACTTGAAGAATTTCGAGCTGCTTGATTATCTGTCTAATCTCAAAAGAATCAGATTAGAGAATGTTTCAATTCCTTTTCTGAGCAAGACTGGAATGCAATTGAAGAATCTGCGGAAGTTCTCTTTTTTTATGTGTAATGTGAATGAAGCGTTCAAAAATAGCAACATTCAAGTTTCAAATGTGCTGCCAAATTTGGAGGAGATGAACATTGATTACTGTGATGTGGTGGAATTGCCAGTTGGGCTCTTTGATATTGTTTCCCTAAAGAAGTTCAGTATCACAAACTGCCATAAGCTTTCTAAACTTCCTGAAGAAATTGGAAACTTGGTAAATTTGGAATCACTAAGTCTTACTTCCTGTACTAGTTTAGAAGTGTTGCCGGACTCGATCACAAGCCTTCATAAACTGAAATATCTTGACATCTCTCACTGTTTAAACCTTGTTAATTTACCAAAGAACGTGAGGGAGATGCGTAGTTTAGAAAAGCTCAATCACAGAGGTTGCGTGAGACTGAGACGTGAGTGTTCGCCCCCTGAACCCCCTGCTTTCACTGTTGGGTTGGATGTTCCCATGAGGGAGTTGAAGCTGAAGTTGCTGAATGACCATCATGGTTTCTCAGTGCTCACGGTGACTGGAACAGGAGGTTCGGGGAAGTCAACGTTGGCCCAAAAGTTTTGCTGGGATAAGGATGTCAAAGGTAAATTCAAGGAAAATATATTCTTCGTTACCTTTGCTAAAACGCCCAAGTTGAAGACCATAGTGCAGAGACTGTTTCAACACAATAATTACCCGGTGCCAGAGTTTCAAAGTGACGATGATACAGTTTATCAATTGGAACATTTGCTAAAAGAGATTGGGAAAAACCCAATACTGTTGGTCCTGGATGATGTTTTGCCCGAATCAGTATCTCTTGTTGACAAATTTGTGTTCCATATCCCAAACTACAAGATTTTAGTGACATCAAGAATCACTATTAGAAGATTTGGACAGCCATACGTGTTGAAACCACTTAATGAAGCCGATGCTATAGATTTATTTTGCCACTCTGCATCCCTGAATCAGAGTAGCTCTGACATTCCTGATAACATTGTCAAGAAGATAGCAAGAGGGTGCAGTGGTTCTCCCTTGGCACTTATAGTGAGTGGCAAATCACTACGTCTTGAACCACCGGTGGTTTGGCACAACAGGACTAAGCAACTGTCCAAGGGTTATTCAATTCTTGACTCTAGTTCTAGTGACGATGTGCTTACTTGTCTCCAAAAAAGCTTCGAAGTCTTGGATGCTAAGGTGGCTGAGTGTTTTAGGGACCTAAGCTTATTTCCTGAAGCCCAGAGGATACCCGCTACTGCCCTTATTGATATATGGGCAGAACTGCTTGATGAAGATGATGACACTGCAATGGAAAATATCCATGAACTCGTCAAACGGAACATGGCTGATATTGTTGTCACAAGGAATACTGCAAGTAGCATGGTTGACTACAATTACCACTATGTTACACAGCATGATCTTCTTCGGGAACTAGCTATCCATCAAACGAGAAAGGAACCAACGGAGAAGAGGAATAGACTAATTATTGACGTAAGAGGTAACAATCTTCCCAAATGGTGGAATACACAGAATGAGTATCACATTGCAGCCCGCACACTATCCATATCAACTGATGAAGAATTCACTTCAGAATGGTGCAACTTGCAGCCAACTGAGGTGGAGGTTCTAGTAATGAACCTTCGGGAAAAGAAGCGCTCACTACCAATGTTCATGAAGAAAATGAATAAATTAAAAGTCTTGATAATAACCAATTATGACTTCCATCGTGCAGACTTGGAAAATTTCGAGTTGCTTGATTATCTATCTGAACTTAGACGAATCAGATTAGAGAAGGTTTCAATTCCTTTCCTGAGCAAGACTGGAGTGCAATTGAAGAATCTGCAGAAGTTCTCTTTCTTTATGTGCAACGTGAATGAAGCATTAAAAAATAGCACCATAAAAGTCTCTAATGTGCTGCCAAATTTGGAGGAGATGAACATTGACTACTGTGATATGGTGGAATTGCCAGTTGGGCTCTCTGATATTGTTTCCCTAAAGAAGCTCAGTATCACAAACTGCCACAAGCTTTCTGCACTTCCTGAAGGAATTGGAAAGTTGGTCAATTTGGAAACACTAAGGCTTACTTCCTGTACTGATTTAGTAGAGTTGCCAGACTCAATCACAAGCCTTCATAAACTGAAATATCTTGACATCTCTGACTGTGTAAGCCTTGGTATGTTACCAGAAAACATGGGGGAGTTGCGTAGTTTAGAAAGGCTCAATTTCAGAGGTTGCACGAGATTGACTGAATTGCCATACTCAATCACGGAGCTTGAGGGTTTAAGGGTCGTGGTATGTGATGAAGAGACGGCTGCATTATGGGAACCATTCAAAACCATGCTTGATGTAATGCTAGAGGTGGCCAAAGTTGATTCGAATTAA 4215 0.4197 MAMAVDAVVGKVLGELLKEVVEMKDRAVKFRPTLESLESTLKKVERLAKQIDGLNNLLDKPAEETKELIDQLEKGKKLVKECSNVQWWNCCHKADYQPELQALNDLIFKYFNLDMQGQIRRDVLENQVMLRELCVEYRNNIPGMTQISGVCSPPGPPSFTVGLDVPLSWLKSMALKDHDGGLVLTVTGPGGSGKSTLTKMFCWDQEVKGKFKENIFFIAFAKTPKFDTILQRLFQHNGFQMPELQNEDDKVNQLENLLRQIGKSPTLLVLDDVSSKSISLIHKFVFSIPNYTILVTSRVTISDFGHPPYALKPLGDVDARNLLCYFASPPNQSSSDDVEKIARWCRGSPLALIVTGRSLNCQSSEDWHDKAEELSTGHSIVASSEDVLTCLQKSFDDLDAKVAECFRDLSLFPEAQRIPVAALVDMWAELCDEDDGNAKKNIKELVIRNMADRDTSDTRNITSDTIDYNYRYVTQHGLLRDLAIFQTSQKPPEKRNRLIIDISGNNLPEWWTTRKKYHIAARTLSISTDEAFTSEWCNLQPTEVEVLVLNLREKKRSLPMFMKKMNKLKVLIITNYDLYHADLKNFELLDYLSNLKRIRLENVSIPFLSKTGMQLKNLRKFSFFMCNVNEAFKNSNIQVSNVLPNLEEMNIDYCDVVELPVGLFDIVSLKKFSITNCHKLSKLPEEIGNLVNLESLSLTSCTSLEVLPDSITSLHKLKYLDISHCLNLVNLPKNVREMRSLEKLNHRGCVRLRRECSPPEPPAFTVGLDVPMRELKLKLLNDHHGFSVLTVTGTGGSGKSTLAQKFCWDKDVKGKFKENIFFVTFAKTPKLKTIVQRLFQHNNYPVPEFQSDDDTVYQLEHLLKEIGKNPILLVLDDVLPESVSLVDKFVFHIPNYKILVTSRITIRRFGQPYVLKPLNEADAIDLFCHSASLNQSSSDIPDNIVKKIARGCSGSPLALIVSGKSLRLEPPVVWHNRTKQLSKGYSILDSSSSDDVLTCLQKSFEVLDAKVAECFRDLSLFPEAQRIPATALIDIWAELLDEDDDTAMENIHELVKRNMADIVVTRNTASSMVDYNYHYVTQHDLLRELAIHQTRKEPTEKRNRLIIDVRGNNLPKWWNTQNEYHIAARTLSISTDEEFTSEWCNLQPTEVEVLVMNLREKKRSLPMFMKKMNKLKVLIITNYDFHRADLENFELLDYLSELRRIRLEKVSIPFLSKTGVQLKNLQKFSFFMCNVNEALKNSTIKVSNVLPNLEEMNIDYCDMVELPVGLSDIVSLKKLSITNCHKLSALPEGIGKLVNLETLRLTSCTDLVELPDSITSLHKLKYLDISDCVSLGMLPENMGELRSLERLNFRGCTRLTELPYSITELEGLRVVVCDEETAALWEPFKTMLDVMLEVAKVDSN 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01534 1404 SUPERFAMILY L domain-like 1249 1374 - -
Pumo5g01534 1404 Coils Coil 34 57 - -
Pumo5g01534 1404 Gene3D - 148 303 IPR027417 -
Pumo5g01534 1404 Gene3D - 756 909 IPR027417 -
Pumo5g01534 1404 FunFam Probable disease resistance protein At5g04720 1139 1318 - -
Pumo5g01534 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 409 IPR027417 -
Pumo5g01534 1404 FunFam Probable disease resistance protein At5g04720 532 710 - -
Pumo5g01534 1404 Pfam NB-ARC domain 178 396 IPR002182 GO:0043531
Pumo5g01534 1404 Pfam NB-ARC domain 772 1005 IPR002182 GO:0043531
Pumo5g01534 1404 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 754 IPR039203 GO:0050832
Pumo5g01534 1404 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 133 IPR008808 -
Pumo5g01534 1404 PRINTS Disease resistance protein signature 865 879 - -
Pumo5g01534 1404 PRINTS Disease resistance protein signature 952 966 - -
Pumo5g01534 1404 PRINTS Disease resistance protein signature 788 803 - -
Pumo5g01534 1404 PRINTS Disease resistance protein signature 1319 1335 - -
Pumo5g01534 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 750 1018 IPR027417 -
Pumo5g01534 1404 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Pumo5g01534 1404 Coils Coil 244 264 - -
Pumo5g01534 1404 Gene3D Ribonuclease Inhibitor 495 755 IPR032675 -
Pumo5g01534 1404 Gene3D Ribonuclease Inhibitor 1096 1391 IPR032675 -
Pumo5g01534 1404 Gene3D - 395 484 IPR036388 -
Pumo5g01534 1404 Gene3D - 1004 1093 IPR036388 -
Pumo5g01534 1404 Gene3D - 314 394 IPR042197 -
Pumo5g01534 1404 SUPERFAMILY L domain-like 641 1286 - -
Pumo5g01534 1404 CDD ABC_ATPase 183 275 - -
Pumo5g01534 1404 Gene3D - 918 1003 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01534 Pumo-Chr5 39739301 39765738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01534 789 1368 WRKY Transcription Factor Family AT5G45050 22.166 2.37e-15 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01534 - - gmx:100812310 1021.15