Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01522 ATGGCACTAAGTTCGAATCTCTCAAGTAAAGTCTCAGTGCAACCTGAAGTTGAGCATCCCAGGAAGGCTTATGGATGGGCAGCTAGGGATACATCTGGTGTTCTCTCCCCTTTTTGCTTCTCTAGAAGGAAAATAGGAGAAAAAGATGTGACATTCAAAGTGTTGTACTGTGGAATATGCCACTCGGACCTTCACAAGTTGAAGAATGAATGGAGTGATTCCATCTATCCACTTGTCCCTGGTCGTGAGATTGTTGGAGAAGTGACAGAGGTGGGAAGCAAAGTGGACAAGTTCAAGGTTGGAGACAAGGTGGCTGTAGGAGTCTTGGTTGGGTCCTGCCACTCATGCCAAAACTGTGTCAACAATCTTGAGAATTACTGCCAACAAGGGATTCCCACATATGGTGCCAAGTATGTGGATGGCACCATCACATATGGGGGATTCTCTGACTTCATGGTTGCAGATGAGCACTTTGTTGTCAACATTCCAAGTGGCCTACCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCAGGGATCACAGTGTATGGCCCTTTGAGATATTTTGGGCTTGACAAACCTGGCATGCATCTGGGTGTGGTTGGCCTTGGTGGACTAGGCCATCTGGCTGTCAAGTTTGCAAAAGCCATTGGCATGAAGGTCACTGTCGTCAGTACCTCTCCTAATAAGAAGAATGAAGCCATACAACATCTTGGAGCTAATTCCTTTGTGGTCAGTAGAGACCAAGATCAAATGCAGGCTGCAATGGGCACCTTGGATGGTATAATTGATACTGTTTCTGCAGTCCATCCTATCATGCCTTTGATTGATCTATTGAAGTCTCATGGGAAACTAGTAACGGTTGGGGCACCAGAAAAGCCTCTGGAGTTGCTACTCCCGCCTTTAATTATGGGGAGAAAAAGTATAGCCGGTAGTTACATTGGAGGGATCAAGGAGACACAAGAAATGATTGATTTTGCTGCTGAACACAATGTTAGACCAGAAATTGAGGTAATTCCTATGGATTATGTGAACACAGCGATGGAGCGTCTCCAAAAATCTGATGTTAAATATCGATTTGTGATTGACATTGGAAACACATTGAAGCCACACTATTAG 1116 0.4498 MALSSNLSSKVSVQPEVEHPRKAYGWAARDTSGVLSPFCFSRRKIGEKDVTFKVLYCGICHSDLHKLKNEWSDSIYPLVPGREIVGEVTEVGSKVDKFKVGDKVAVGVLVGSCHSCQNCVNNLENYCQQGIPTYGAKYVDGTITYGGFSDFMVADEHFVVNIPSGLPLDAAAPLLCAGITVYGPLRYFGLDKPGMHLGVVGLGGLGHLAVKFAKAIGMKVTVVSTSPNKKNEAIQHLGANSFVVSRDQDQMQAAMGTLDGIIDTVSAVHPIMPLIDLLKSHGKLVTVGAPEKPLELLLPPLIMGRKSIAGSYIGGIKETQEMIDFAAEHNVRPEIEVIPMDYVNTAMERLQKSDVKYRFVIDIGNTLKPHY 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01522 371 Gene3D - 26 363 - -
Pumo5g01522 371 Pfam Alcohol dehydrogenase GroES-like domain 48 161 IPR013154 -
Pumo5g01522 371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 331 IPR036291 -
Pumo5g01522 371 FunFam Putative cinnamyl alcohol dehydrogenase 6 334 363 - -
Pumo5g01522 371 SMART PKS_ER_names_mod 33 361 IPR020843 GO:0016491
Pumo5g01522 371 CDD CAD1 25 362 IPR047109 GO:0016616
Pumo5g01522 371 PANTHER ALDEHYDE REDUCTASE 15 366 IPR047109 GO:0016616
Pumo5g01522 371 FunFam Cinnamyl alcohol dehydrogenase 177 333 - -
Pumo5g01522 371 Pfam Zinc-binding dehydrogenase 204 327 IPR013149 -
Pumo5g01522 371 Gene3D - 177 333 - -
Pumo5g01522 371 FunFam Uncharacterized protein 26 176 - -
Pumo5g01522 371 SUPERFAMILY GroES-like 31 194 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01522 Pumo-Chr5 39409350 39414471 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01522 21 370 Monolignol Biosynthesis Gene Families AT4G37990 68.857 6.59e-166 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01522 K23232 - gmx:100812491 671.774