Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01520 ATGGCAGTGCAACCTGAAGTTGAGCATCCCAGGAAGGCTTATGGATGGGCAGCTAGGGATACATCTGGTGTTCTCTCCCCTTTTTGCTTCTCTAGAAGGAAAACAGGAGAAAAAGATGTGACATTCAAAGTGTTGTACTGTGGAATATGCCACTCGGACCTTCACAAGTTGAAGAATGAATGGAGTGATTCCATCTATCCACTTGCTGCAATGGGCACCTTGGATGGTATAATTGATACTGTTTCTGCAGTCCATCCTATCATGCCTTTGATTGATCTATTGAAGTCTCATGGGAAACTAGTAACGGTTGGGGCACCAGAAAAGCCTCTGGAGTTGCTACTCCCGCCTTTAATTATGCGGAGAAAAAGTATAGTTGGTAGTTACATTGGAGGAATCAAGGAGACACAAGAAATGATTGATTTTTCTGCTGAACACAATGTTAGACCAGAAATTGAGGTAATTCCTATGGATTATGTGAACACGGCGATGGAGCGTCTCCAAAAAGCTGACGTTAAATATCGATTTGTGATTGACATTGGAAACACATTGAAGCCACACTATTAG 564 0.4238 MAVQPEVEHPRKAYGWAARDTSGVLSPFCFSRRKTGEKDVTFKVLYCGICHSDLHKLKNEWSDSIYPLAAMGTLDGIIDTVSAVHPIMPLIDLLKSHGKLVTVGAPEKPLELLLPPLIMRRKSIVGSYIGGIKETQEMIDFSAEHNVRPEIEVIPMDYVNTAMERLQKADVKYRFVIDIGNTLKPHY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01520 187 FunFam Putative cinnamyl alcohol dehydrogenase 6 68 149 - -
Pumo5g01520 187 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 69 147 IPR036291 -
Pumo5g01520 187 Gene3D - 70 149 - -
Pumo5g01520 187 Gene3D - 150 179 - -
Pumo5g01520 187 Gene3D - 16 68 - -
Pumo5g01520 187 Pfam Zinc-binding dehydrogenase 69 143 IPR013149 -
Pumo5g01520 187 SUPERFAMILY GroES-like 10 68 IPR011032 -
Pumo5g01520 187 Pfam Alcohol dehydrogenase GroES-like domain 38 79 IPR013154 -
Pumo5g01520 187 PANTHER ALDEHYDE REDUCTASE 5 68 IPR047109 GO:0016616
Pumo5g01520 187 FunFam Putative cinnamyl alcohol dehydrogenase 6 150 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01520 Pumo-Chr5 39389935 39393988 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01520 11 83 Monolignol Biosynthesis Gene Families AT4G37990 61.644 1.03e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01520 K23232 - mtr:11426261 267.7