Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01511 ATGCCTTCATCGTCGTCTTCTTCCGCTCTTACCATTCCCAATTTGCGTCTTCGCGCTCTCAGAATTTGGTCCTCCAAGGACTACGCAGTCGCCGCATTCATCTTCCTCGTCCTCTTCTCTCTCGTTATCTTCTCCCACTTGGATTCCCGTTCTCGTTACGATTCTCATTCCCACTCCCATGACTCCTCCAACCTCGTTCCCTTAACCCTCCTCGGCAACGCCAACCAAACGGGCGCGCTTTGCTTGGACGGGAGCGCCCCCGGTTACCATTTCCAACGCGGGTTCGGATCCGGATCCCGCAACTGGTTGATCCACGTCGAGGGAGGAGGGTGGTGCAATTCGATATCTTCATGTTCTCAGCGAAAATTCTCTCATTTGGGGTCTTCCAAGTATATGGAGAGGCTTATTCCTTTTTCTGGAATATTGAGCTCCGACCCTTCTCAGAACCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGACGGCGCATCGTTTGCCGGTCACCCAGAGAGTGAGCAGAGAGGAAGTGGGTTGTTCTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAACTGGCCTGTCTAAAGCAAAGCAGGCTTTGCTTTCAGGATGCTCTGCTGGAGGGTTGACAACTCTTATACACTGTGATAACTTCCGACAAGTACTTCCAAAGGAAGCAACTGTCAAGTGTCTTTCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCTTTCTATCGTGATGTTGTCCAGCTTCAGTTGGTTCATATATTTCAGCTAAAGAACAACCGTGTATTTGTAATGCAGTGTCTCTTTCCATCAGAAATTGTTAAAAACATAAAGACTCCATTGTTCCTTGTTCATCCAGGTTATGATTTCTGGCAGATACGCAATATTTTGGTGCCTCAAGGATCAGATCCCCATGGTCACTGGCAAAGCTGCAAACTGAACATTCACAATTGTAATGCTAACATGATTGATAAACTTGACAGTTACCGTGGCTCTTTGCTGAAGGCTGTGAATGAATTCCTACAACGAAAGGAGATTGGAATGTTTATAGATTCCTGCTTTGTCCATTGCCAGACTGAGATGGAAGTGACGTGGCATTCACCCAATTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGGCCGAGAAGCGATACATATAACATAA 1242 0.4565 MPSSSSSSALTIPNLRLRALRIWSSKDYAVAAFIFLVLFSLVIFSHLDSRSRYDSHSHSHDSSNLVPLTLLGNANQTGALCLDGSAPGYHFQRGFGSGSRNWLIHVEGGGWCNSISSCSQRKFSHLGSSKYMERLIPFSGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPESEQRGSGLFFRGQVIWEAIMDELLSTGLSKAKQALLSGCSAGGLTTLIHCDNFRQVLPKEATVKCLSDAGFFLDEKDISGNSTMRSFYRDVVQLQLVHIFQLKNNRVFVMQCLFPSEIVKNIKTPLFLVHPGYDFWQIRNILVPQGSDPHGHWQSCKLNIHNCNANMIDKLDSYRGSLLKAVNEFLQRKEIGMFIDSCFVHCQTEMEVTWHSPNSPKINDKTIAESVGDWYFGREAIHIT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01511 413 PANTHER NOTUM-RELATED 38 409 IPR004963 GO:0016787
Pumo5g01511 413 Pfam Pectinacetylesterase 62 408 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01511 Pumo-Chr5 39254451 39266813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01511 10 395 Carbohydrate Esterase AT3G09410 54.962 8.75e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01511 K19882 - gmx:100792819 685.641