Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01505 ATGGACCGATGCTATGACCTCTTGGAGGTCAAAGCAAAGGAGATTTCAGTTTGGGATGACAGAGATGGGCAAATTCACCTCCGGGGACTATCTCAGGTTCCTATAAACACAATGTCTGAATTTCAAGATGTTTTCTCTTGTGGAGTTCAGAGACGCAAAGTTGCACACACAGGCCTCAATGATGTCTCTAGTAGGAGTCATGGAGTGCTTGTCATATCTGTGTCCACTCCTTCAGCTGATGGCACTGGAACTTTTGTATGTGGAAAGTTGAATCTCATAGACTTGGCAGGTAATGAAGACAACAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCCAAGATAAACCAGTCCTTGTTTGCACTGTCAAATGTGATATATGCATTGAACAACAATAAACCAAGGGTACCCTACCGAGAAAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGTGGAACGAGTCGTGCATTGATGGTTGCTTGCCTGAACCCAGGAGAATACCAGGAATCTGTTCATACTGTTAGTTTAGCTGCTCGATCAAGGCATGTCTCTAATTTTGTGCCTTCAGCTCACAAACAAGAGACCCCGAAAAGTTAA 606 0.4439 MDRCYDLLEVKAKEISVWDDRDGQIHLRGLSQVPINTMSEFQDVFSCGVQRRKVAHTGLNDVSSRSHGVLVISVSTPSADGTGTFVCGKLNLIDLAGNEDNRRTCNEGIRLQESAKINQSLFALSNVIYALNNNKPRVPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAHKQETPKS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01505 201 PRINTS Kinesin heavy chain signature 138 159 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01505 201 PRINTS Kinesin heavy chain signature 89 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01505 201 PRINTS Kinesin heavy chain signature 57 74 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01505 201 Pfam Kinesin motor domain 2 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01505 201 ProSitePatterns Kinesin motor domain signature. 88 99 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo5g01505 201 Gene3D Kinesin motor domain 1 201 IPR036961 -
Pumo5g01505 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 190 IPR027417 -
Pumo5g01505 201 ProSiteProfiles Kinesin motor domain profile. 1 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01505 201 SMART kinesin_4 1 194 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01505 201 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 190 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01505 Pumo-Chr5 39174894 39175801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01505 2 194 Calmodulin-binding Proteins AT5G65930 36.181 5.58e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01505 K10403 - gmx:100804591 391.734