Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g01497 | ATGGGTGCTTGCTGGAGTAATAGGATTAAGGCTGTGAGTCCTTCCATTACAGGAATCACTTCTAGAACTGTCAGCAGAAGTGGCCATGACATCAGTTCAAATAGCAGGAACTCGTCAGCCTCCATATCCGTCACTTCTCGGAGTGAGGGTGAGATCTTGCAATCTTCCAACTTGAAAAGCTTCAGCTATAATGAGCTTAGAGCGGCCACAAGAAATTTCCGCCCGGATAGTGTCTTGGGGGAGGGTGGGTTTGGTTCAGTTTTTAAAGGCTGGATTGATGTGCATTCACTTACTGCTACCAAACCAGGAATAGGCATGATTGTTGCTGTGAAGAGGCTTAACCAAGACGGGTTCCAGGGTCACAGAGAGTGGTTGGCTGAAATCAACTATCTCGGGCAACTACAGCATCCTAACCTTGTCAAGTTAATAGGATACTGCTTTGAGGATGAACATCGGCTTCTGGTTTATGAATTTATGCCTAAGGGTAGCATGGAAAATCATCTTTTCCGAAGAGGTTCTTACTTTCAGCCATTCTCTTGGAGTTTGCGAATGAAAATAGCACTTGGGGCTGCAAAGGGCCTTGCTTTTCTTCATAGTACTGAACCTAAAGTCATATACCGTGACTTTAAAACTTCAAATATCCTACTCGATACAAACTATAATGCCAAACTTTCTGATTTTGGGTTGGCTAGAGATGGTCCTACTGGTGATAAAAGCCATGTCTCTACTAGGGTCATGGGAACCCGTGGATATGCGGCACCAGAGTATTTAGCAACAGGTCATCTCACTACCAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCAGGAAGACGAGCGATAGACAAGAACCAGCCAACTGGAGAGCATAACCTTGTTGAATGGGCCAAGCCTTACCTATCTAATAAACGAAGAGTTTTCCGAGTAATGGATCCCCGTCTCGAAGGTCAATATTCACATAGTCGAGCTCAAGCAGCAGCTGCGCTTGCTGTGCAATGTCTTGCTGTAGAGCCTAAGTACAGGCCAAATATGGATGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCTGATCATAAACAGCACCATGTACACAATTCTGGCCCTGGCCGTTCCAAAGGTGGCGATGGTGGTGCAGATGTGCCTAGAAAGGCTTCTGCTTATCCTAGACCTTCTGCTGCTCTCCTCCGTGGTTGA | 1233 | 0.455 | MGACWSNRIKAVSPSITGITSRTVSRSGHDISSNSRNSSASISVTSRSEGEILQSSNLKSFSYNELRAATRNFRPDSVLGEGGFGSVFKGWIDVHSLTATKPGIGMIVAVKRLNQDGFQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTTKSDVYSFGVVLLEMISGRRAIDKNQPTGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHSRAQAAAALAVQCLAVEPKYRPNMDEVVKALEQLQESKDMQRKGADHKQHHVHNSGPGRSKGGDGGADVPRKASAYPRPSAALLRG | 410 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g01497 | 410 | MobiDBLite | consensus disorder prediction | 21 | 42 | - | - | |
Pumo5g01497 | 410 | FunFam | Serine/threonine-protein kinase BIK1 | 39 | 158 | - | - | |
Pumo5g01497 | 410 | Pfam | Protein kinase domain | 76 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01497 | 410 | FunFam | Probable serine/threonine-protein kinase PBL8 | 159 | 375 | - | - | |
Pumo5g01497 | 410 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 382 | - | - | |
Pumo5g01497 | 410 | MobiDBLite | consensus disorder prediction | 361 | 410 | - | - | |
Pumo5g01497 | 410 | MobiDBLite | consensus disorder prediction | 361 | 377 | - | - | |
Pumo5g01497 | 410 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 204 | 216 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo5g01497 | 410 | ProSiteProfiles | Protein kinase domain profile. | 73 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01497 | 410 | PANTHER | OS01G0588500 PROTEIN-RELATED | 37 | 359 | - | - | |
Pumo5g01497 | 410 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 111 | IPR017441 | GO:0005524 | |
Pumo5g01497 | 410 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 355 | IPR011009 | - | |
Pumo5g01497 | 410 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 158 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g01497 | Pumo-Chr5 | 39045270 | 39048985 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g01497 | 51 | 363 | Glycoside Hydrolase | AT3G07070 | 51.274 | 1.56e-107 | 321 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Pumo5g01497 | Pkinase | 2.6e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g01497 | - | - | gmx:100819620 | 752.666 |