Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01491 ATGCAAAGATTGATGATTATGGATCCACGCCTTCGTGGGTTTAGTGGTCCCCCTAATGAAATCCAGTTGGGGAATCAGAGATTTGAAAATGATTTCTTTGATCAAAGTAGGGAATTTGGTTACCTTCAGTCCAATCTAGTACCAACTAACAACGCACCTTCTTCATCCTCGGTTTTGACTCATGAGGAACCTTCTCCGGAGGATTGTGAATTTTCTGATGGAATTTTGAGTTACATCAGTCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGCTGCAAGATTCTTTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTGATAGGTGAAAAGTACCCTTCACCGCCTTTAGGAAATCCTACTCCTGTTGATCCAGATGATGGGGGTGGGGATCATAATTTCTCTGAAAATTATGGTACTTGTTCTTATAATGATGGTGATCTCAGTAGCATATTTACTAACAATTCTTTGCGCCAAAACTTGGGTGAACTTCCTAACCAGTATTTTCAAGGCAATAGCATTTCACAGTCATCTTATAGCTCTTCAAATAGTGTGATAAGTAGTGTGGAAGGGCCTGTGGATTCTCCAAGTAGTATTCTCCAGGTTCCTGATCTGAACAGTGAGACTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAGGCTAGCAAGTTTCTTCCAAGTGGAAATGACCTCTTTGCTAATTTGGGTGTGGCTAATTTTTCAACACTAGGGCCTAGAGTGGGGAGTGATGAATTACCTGTTAAGGTGGAGAAGGATGAGGGTGAGTCTTTTCCTGCTGGATCCAAAGGAAGGAAACATCATCACAGGGAAGACGGGGATGTTGAAGAAAGTAGACGCAGCAAACAAGCCGCAATTTTCTCTGAACCTACATTGCGATCATCTATGATTGATATAATCCTGCTTAATACTTTAGGGGATGGTAAGAAGCATTTTATGGCCCGTCGTGAGGCTTTGCAAATTAAGAATGATAAGATAGTGGTGTCAAATGGTAAATCAAAGGCTTCCAATGGTGGCAAGGGGCGTGGTAAGAAACAAAATGGAAAAAAGGAAGTGGTTGATTTGAGAACACTTTTGGTTCTATGTGCACAAGCTGTAGCAGCAGATGACTTTAAAAGCGCGCATGAGTTGCTAAAGCGGATCAGGCAGCACTCAAATCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAAGCGCGCTTGGCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTGAAGGCCTATCATCTATATCTTGCTGCTTGCCCTTTTAGGAGGATGACTAGTTTTATCTCTAATGTTACAATAAGGAAATCTTCATCAAATTCACCAAGGCTCCATATTATAGATTTCGGTATCCTTTATGGTGTCCAGTGGCCTACTTTAATTCAGAGACTTTCATTAGCAGTAGGAGGAGCACCTAAACTTCGGATTACAGGGATAGACTTCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTGTAGAAACTGGACGCCGCTTGGCGGCATATGCTGAATCATTTAAGGTGGAATTTGAGTACAATGCTATAGCCAAAAAATGGGAAACAATTCAACTTGAGGAACTCAAGATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTTTTCGCGGTAAAAATGTGCTGGATGAATCTGTGGTTGTGGACAGTCCAAGGAATAAATTCCTCAGTTTGATAAGGAAGATCAACCCAGATTTATTCATTCATGGCATTACTAATGGGGCATTTAATGCTCCTTTCTTTGTTACTCGATTCAGGGAGGCACTATTTCACTACTCTTCACTTTTTGACATGCTTGAAACCATTGTGCCTCGCGAGGACTGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGTAGGGAAGCATTGAATGTCATAGCTTGTGAAGGCTGTGAGAGAGTAGAGAGGCCAGAGACATACAGGCAGTGGCAAGCCCGGATTCTAAGGGCTGGATTTTTGCAACAATCTTTTGAGCGCGAGTTAGTAAAGAGGGCTATAGAGAAAGTAACGACTAGCTACCACAAAGATTTTTTAATTGATGAAGATAGCCAATGGTTGTTGCAAGGTTGGAAGGGGCGAATTGTTTTCGCCGTTTCTTGTTGGAAACCTGCATGA 2220 0.4185 MQRLMIMDPRLRGFSGPPNEIQLGNQRFENDFFDQSREFGYLQSNLVPTNNAPSSSSVLTHEEPSPEDCEFSDGILSYISQILMEEDMEDKTCMLQDSLDLQIAERSFYEVIGEKYPSPPLGNPTPVDPDDGGGDHNFSENYGTCSYNDGDLSSIFTNNSLRQNLGELPNQYFQGNSISQSSYSSSNSVISSVEGPVDSPSSILQVPDLNSETQSILQFQKGVEEASKFLPSGNDLFANLGVANFSTLGPRVGSDELPVKVEKDEGESFPAGSKGRKHHHREDGDVEESRRSKQAAIFSEPTLRSSMIDIILLNTLGDGKKHFMARREALQIKNDKIVVSNGKSKASNGGKGRGKKQNGKKEVVDLRTLLVLCAQAVAADDFKSAHELLKRIRQHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRRMTSFISNVTIRKSSSNSPRLHIIDFGILYGVQWPTLIQRLSLAVGGAPKLRITGIDFPQPGFRPAERIVETGRRLAAYAESFKVEFEYNAIAKKWETIQLEELKIDRDEYLVVTCFFRGKNVLDESVVVDSPRNKFLSLIRKINPDLFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFLQQSFERELVKRAIEKVTTSYHKDFLIDEDSQWLLQGWKGRIVFAVSCWKPA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01491 739 MobiDBLite consensus disorder prediction 253 298 - -
Pumo5g01491 739 MobiDBLite consensus disorder prediction 46 62 - -
Pumo5g01491 739 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 290 730 IPR005202 -
Pumo5g01491 739 MobiDBLite consensus disorder prediction 46 67 - -
Pumo5g01491 739 MobiDBLite consensus disorder prediction 115 135 - -
Pumo5g01491 739 Pfam GRAS domain family 366 737 IPR005202 -
Pumo5g01491 739 ProSiteProfiles GRAS family profile. 357 737 IPR005202 -
Pumo5g01491 739 MobiDBLite consensus disorder prediction 256 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01491 Pumo-Chr5 38918859 38922665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01491 67 738 GRAS Transcription Factor Family AT2G37650 52.339 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo5g01491 GRAS 3.1e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01491 - - gmx:100801824 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01491 5 38918859 38922665 Pumo5g01491 5 38918859 38922665 ECH