Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01487 ATGGCAGTGCAACCTGAAGTTGAGCATCCCTGGAAGGCTTATGGATGGGCAGCTAGGGATACATCTGGGGTTCTCTCCCCTTTTTGCTTCTCTAGAAGGAAAACAGGAGAAAAAGATGTGACATTCAAAGTGTTGTACTGTGGAATATGCCACTCGGACCTTCACAAGTTGAAGAATGAATGGAGTGATTCCATCTATCCACTCGTCCCTGGTCGTGAGATTGTTGGAGAAGTGACAGAGGTGGGAAGCAAAGTGGACAAGTTCAAGGTTGGAGACAAGGTGGCTGTAGGAGTCTTGGTTGGGTCCTGCCACTCATGCCAAAACTGTGTCAACAATCTTGAGAATTATTGTCAACAAGGGATTCCTGCATATGGTGCCAAGTATGTGGATGGCACCATCACATATGGGGGATTCTCTGACTTCATGGTTGCAGATGAGCACTTTGTTGTCAACATTCCAAGTGGCTTACCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCAGGGATCACAGTGTATGGCCCTTTGAGATATTTTGGGCTTGACAAACCTGGCATGCATCTGGGTGTGGTTGGCCTTGGTGGACTAGGCCATCTGGCTGTCAAGTTTGCAAAAGCCCTTGGCTTGAAGGTCACTGTCATCAGTACCTCTCCTAATAAGAAGAATGAAGCCATACAACATCTTGGAGCTAATTCCTTTGTGGTCAGTAGAGACCAAGATCAAATGCAGGCTGCAATGGGCACCTTGGATGGTATAATTGATACTGTTTCTGTAGTCCATCCTATCATGCCTTTGATTGATCTATTGAAGTCTCATGGGAAACTAGTAACGGTTGGGGCACCAGAAAAGCCTCTGGAGTTGCTACTCCCGCCTTTAATTATGGGGAGAAAAAGTATAGCCGGTAGTTACATTGGAGGAATCAAGGAGACACAAGAAATGATTGATTTTGCTGCTGAACACAATGTTAGACCAGAAATTGAGGTAATTCCTATGGATTATGTGAACACAGCGATGGAGCGTCTCCAGAAAGCTGACGTTAAATATCGATTTGTGATTGACATTGGAAACACATTGAAGTCACACTATTAG 1086 0.4521 MAVQPEVEHPWKAYGWAARDTSGVLSPFCFSRRKTGEKDVTFKVLYCGICHSDLHKLKNEWSDSIYPLVPGREIVGEVTEVGSKVDKFKVGDKVAVGVLVGSCHSCQNCVNNLENYCQQGIPAYGAKYVDGTITYGGFSDFMVADEHFVVNIPSGLPLDAAAPLLCAGITVYGPLRYFGLDKPGMHLGVVGLGGLGHLAVKFAKALGLKVTVISTSPNKKNEAIQHLGANSFVVSRDQDQMQAAMGTLDGIIDTVSVVHPIMPLIDLLKSHGKLVTVGAPEKPLELLLPPLIMGRKSIAGSYIGGIKETQEMIDFAAEHNVRPEIEVIPMDYVNTAMERLQKADVKYRFVIDIGNTLKSHY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01487 361 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Pumo5g01487 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Pumo5g01487 361 FunFam Uncharacterized protein 16 166 - -
Pumo5g01487 361 Gene3D - 167 323 - -
Pumo5g01487 361 Gene3D - 16 353 - -
Pumo5g01487 361 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Pumo5g01487 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Pumo5g01487 361 SUPERFAMILY GroES-like 21 184 IPR011032 -
Pumo5g01487 361 CDD CAD1 15 352 IPR047109 GO:0016616
Pumo5g01487 361 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Pumo5g01487 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Pumo5g01487 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01487 Pumo-Chr5 38822674 38826768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01487 12 358 Monolignol Biosynthesis Gene Families AT4G37990 69.452 1.70e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01487 K23232 - gmx:100812491 670.233