Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01467 ATGCAGAGAGGTAAGATGAAGCTAGATGAGGATCTGGGTCCTGATCGTGAGGATGATTTCCAAACTGATGATGAAGAAAATCAGGCACATAGGGTGTTTGAACATTTGGATGATGATACCGATTCAGATAATTCAGCTCCTTCACGAACTTTGTCCAATGAGGTTTCCATTATCTCTTGGCCTCAAAGCTATAGCAGGCAATCTATGGACATGTTAACTAGTGTAACACCACCCGGAATTACTTTCCTAAGGAGGATTGGTTCAGTAGGGAGAGGTAACTCTCCCACTACATCATTCAAGAGATCTCAAGAAAATCAAGAGGATTCTTCTCTGACTCTACCTCTTGTTGCCGAGACAAGTTCAATCAAACAAGAGAAACAGATTGTCTCAGCACCTTATTTGCAATCACTTGTCTCTAGTAGTGCAAGATTTTCTGTGAATGAATTGCCACCGCCACAACAACAATGTTCATTTATAAAATCAGTAATTAATGGAATCAATATATTATGTGGGATAGGAATTCTTACCATTCCATATGCAATGAGAGAAGGAGGGTGTCTGAGCCTTATAATACTTCTAATGTTTGCTATCATGTGTTGTTATACTGGGATGTTATTAATAAGATGTTTAGAAAGCAACTCTGGACTCAAAACCTACCCAGATATTGGCCAAGCTGCTTTTGGAATTGTTGGTCGCTTGGGGATTGCGGCTTCTTGTGTTGAGTATATAATACTAGTCAGTGATAACCTCTCATCACTATTTCCAAACACCCACATGAGAGTTGGTGGGACTGATTTTGATAATGAACAAATTTTTGCCATCACAGCAGCTATTCTTGTTCTACCAACAGTTTGGCTGCGAAATCTAAGCTTACTTTCTTATATTTCAGTGGGAGGAATATTTGCAACAATACTAGTTGCACTCTGCTTGTTTTGGGTTGGGATCATAGACCAAGTTGATGGATTCAAGCCAGGAGAAAAAGTTTTAGACTTGTCAAACATATCTGTCTCAATTGGCCTCTATAGTTTTTGCTTTGCTGGTCATGCAGTTTTTCCTAATATCTACTCTTCCATGAAGGAACCATCCAAATTCCCATCAGTGTTATATGTCTGCTTTGCCTTTTGTGTTTTTATGTACATGAGTGTGGGAATAATGGGCTATTTAACGTTTGGTGACTCAGTTGCATCTCAGTTTACCTTAAACATGCCCAAAGAATTATATGCATCCGAGATTGCGACCTGGACAACTGTTGTGACTCCATTGGCAAAATATGCCTTAACATTATTGCCTATTGCATTGAGCATAGAGGAACTCGCCACCTCTCCTAGGCTAAGATGTCATGCTATGTCTGTTCTTGTCAGAACATGTTTAGTGATTTTAAGTTTACTTGTGGCTCTCTATATTCCATATTTTGGTTCTTTGATGGCACTAATTGGTTCTTTCATGTCAATACTAGTTGCACTTCTTTATCCTTGTGCATGTTTCCTCAAGTTACATAGTGGCAGATTATCAAATTTAGAGATAACAAATTGTGTTTTGATAATTGTTGTGGGGCTGGTATGCGCTTTTGTTGGAACACATTCAGCTATTTTAAAAATAGCTGGCGAAGGGGACTGA 1617 0.389 MQRGKMKLDEDLGPDREDDFQTDDEENQAHRVFEHLDDDTDSDNSAPSRTLSNEVSIISWPQSYSRQSMDMLTSVTPPGITFLRRIGSVGRGNSPTTSFKRSQENQEDSSLTLPLVAETSSIKQEKQIVSAPYLQSLVSSSARFSVNELPPPQQQCSFIKSVINGINILCGIGILTIPYAMREGGCLSLIILLMFAIMCCYTGMLLIRCLESNSGLKTYPDIGQAAFGIVGRLGIAASCVEYIILVSDNLSSLFPNTHMRVGGTDFDNEQIFAITAAILVLPTVWLRNLSLLSYISVGGIFATILVALCLFWVGIIDQVDGFKPGEKVLDLSNISVSIGLYSFCFAGHAVFPNIYSSMKEPSKFPSVLYVCFAFCVFMYMSVGIMGYLTFGDSVASQFTLNMPKELYASEIATWTTVVTPLAKYALTLLPIALSIEELATSPRLRCHAMSVLVRTCLVILSLLVALYIPYFGSLMALIGSFMSILVALLYPCACFLKLHSGRLSNLEITNCVLIIVVGLVCAFVGTHSAILKIAGEGD 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01467 538 MobiDBLite consensus disorder prediction 90 106 - -
Pumo5g01467 538 MobiDBLite consensus disorder prediction 23 44 - -
Pumo5g01467 538 Pfam Transmembrane amino acid transporter protein 156 530 IPR013057 -
Pumo5g01467 538 PANTHER AMINO ACID TRANSPORTER 151 521 - -
Pumo5g01467 538 MobiDBLite consensus disorder prediction 86 106 - -
Pumo5g01467 538 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01467 Pumo-Chr5 38532421 38537721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01467 6 536 Amino Acid or Auxin Permease AAAP Family AT5G02180 47.872 7.06e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01467 K15015 - cave:132161847 597.43