Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01457 ATGATGTCTCTCAAGGTTGTAACAGTGGTGCTTATGCTGGCAACAATAGTAGTGGCCAGTGATGATGACACTAGTTTCACCTATAATGGGTTCCAATCATCTCATTTGTACCTTGATGGCAGTGCTGGGTTCACCACCAATGGCATGCTTAAGCTCACCAATCACACCAAGCAACAAAAGGGTCATGCTTTCTTCCCAAGTCCAATAGTCTTCAAGAACACCACAAATGGAAGTGTATCTTCTTTCTCCACCACTTTTGTGTTTGCCATAAGGTCTGAGTATCCCAATTTGAGTGGTCATGGGATTGTTTTTGTGGTTTCTCCAACAAAAGGGGTTCCACATTCTCTTCCAAGCCAGTACCTTGGCCTCTTTGATGACACCAACAATGGCAACAACAGCAACCATGTTTTTGGGGTGGAACTTGATACCATTCTGAACACTGAGTTTGGTGATATCAATGACAACCATGTTGGAATTGATGTCAACGAATTGAAGTCGGTTAAATCGGCTTCTGCAGGGTATTACAGCAATGAGGGGTTTAAGAATTTGAGTCTCATCAGTGGCTACCCAATGCAGTTATGGGTGGAATATGATGGCCTAAAGAAGCAGATTGATGTTACTTTAGCTCCAATCAACATTGGCAAACCAGAAAGACCTTTGTTATCATTGAGCAGAGATCTTTCTCCAATTCTGAACAGTAGCATGTATGTTGGATTCTCATCCTCAACTGGGTCAATTCTAAGTTCTCATTATGTGTTGGGTTGGAGCTTTAAGGTGAATGGCAAGGCTCAACAACTTGCAATCTCTGAACTCCCTATGCTACCAAGACTCGGTAGTAAAGAAGTATCTAAGGTTCTCATTGTTGGGTTGCCTCTGATATCATTATGTTTGGTTCTCATGGTGGCACTAGCAGTGGTTCATGTCATCAAAAAGAAGAAGTTCACGGAGCTGCTTGAAGATTGGGAGCAAGACTATGGTCCTCATAGGTTCAAGTACAAAGATCTTAGCCTGGCAACAAAGGGGTTCAGGGAGAAGGAGCTATTGGGGAGTGGTGGATTCGGTAGAGTCTACAAAGGTGTGATGCCAATTTCCAAAATTGAGGTTGCAGTGAAGAAGGTGTCCCATGAATCAAGACAAGGGATGAGGGAATTTGTGGCGGAAATCGTCAGCATTGGCCGTCTTAGGCACCGGAATCTGGTTCCCCTTCTGGGGTACTGCAGGCGCAAAGGAGAGTTGCTATTGGTCTATGACTACATGCCAAATGGAAGCCTTGACAAGTATCTCTATAACAAACCAAGAGTGACCCTGAATTGGAGCCAGAGATTTAGAATCACCAAAGGGGTTGCTTCAGGTCTGTTTTATCTGCATGAGGAGTGGGAGCAAGTTGTGGTCCACAGAGACATTAAGGCTAGCAATGTGCTACTTGATGCTGAATTGAATGGTAGATTAGGGGACTTTGGTCTTTCAAGGTTATATGAACATGGAACTGATCCTCACACTACTCATGTGGTAGGAACACTTGGGTACCTAGCACCTGAGCACACTAGAACAGGTAAGGCTACTACAAACTCTGATGTGTTTGCTTTTGGTGCATTTATGCTAGAGGTTGTTTGTGGAAGGAGGCCAATAGAGCAAGTAGGGGAATCCGGGAGCGAAATTCTGGTTGATTGGGTGTATAATTGTTGGAAAAAGGGTGAGATTCTTGAGGCAAGGGATCCAAACTTGGGCACAAATTATAGGCCAGATGAGGTGGAATTGGTGTTGAAACTTGCTTTGTTGTGCTCACATTCTGAGCCTTTGGCTAGGCCAAGCATGCGCCAGGTTGTGCAATACTTGGAGAAAGATGTGCCTCTGCCAGATTTGTCTATGCTTAGCTTATCTTCAACTGGCTTAACTTTTGGTCATGAAGACTTTCAGGACTGTCCAATGTCTTATCCTTCATCTATGGATAGGCCAATATCCCATACTTCTTCAATTGCTGAATCACTTCTCTCTGGGGGTCGTTGA 2007 0.441 MMSLKVVTVVLMLATIVVASDDDTSFTYNGFQSSHLYLDGSAGFTTNGMLKLTNHTKQQKGHAFFPSPIVFKNTTNGSVSSFSTTFVFAIRSEYPNLSGHGIVFVVSPTKGVPHSLPSQYLGLFDDTNNGNNSNHVFGVELDTILNTEFGDINDNHVGIDVNELKSVKSASAGYYSNEGFKNLSLISGYPMQLWVEYDGLKKQIDVTLAPINIGKPERPLLSLSRDLSPILNSSMYVGFSSSTGSILSSHYVLGWSFKVNGKAQQLAISELPMLPRLGSKEVSKVLIVGLPLISLCLVLMVALAVVHVIKKKKFTELLEDWEQDYGPHRFKYKDLSLATKGFREKELLGSGGFGRVYKGVMPISKIEVAVKKVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYNKPRVTLNWSQRFRITKGVASGLFYLHEEWEQVVVHRDIKASNVLLDAELNGRLGDFGLSRLYEHGTDPHTTHVVGTLGYLAPEHTRTGKATTNSDVFAFGAFMLEVVCGRRPIEQVGESGSEILVDWVYNCWKKGEILEARDPNLGTNYRPDEVELVLKLALLCSHSEPLARPSMRQVVQYLEKDVPLPDLSMLSLSSTGLTFGHEDFQDCPMSYPSSMDRPISHTSSIAESLLSGGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01457 668 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Pumo5g01457 668 CDD STKc_IRAK 348 614 - -
Pumo5g01457 668 ProSiteProfiles Protein kinase domain profile. 342 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01457 668 Gene3D - 21 272 - -
Pumo5g01457 668 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01457 668 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01457 668 ProSitePatterns Protein kinases ATP-binding region signature. 348 372 IPR017441 GO:0005524
Pumo5g01457 668 Gene3D Transferase(Phosphotransferase) domain 1 419 626 - -
Pumo5g01457 668 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Pumo5g01457 668 PANTHER - 39 617 - -
Pumo5g01457 668 SUPERFAMILY Protein kinase-like (PK-like) 323 623 IPR011009 -
Pumo5g01457 668 FunFam L-type lectin-domain containing receptor kinase V.9 23 264 - -
Pumo5g01457 668 Pfam Legume lectin domain 24 271 IPR001220 GO:0030246
Pumo5g01457 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 278 IPR013320 -
Pumo5g01457 668 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Pumo5g01457 668 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
Pumo5g01457 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01457 Pumo-Chr5 38389089 38391523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01457 19 668 Receptor kinase-like Gene Family AT2G37710 64.177 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pumo5g01457 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01457 - - gmx:100783815 1214.13