Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01433 ATGGAAGGAGAGATATGGTCCTGGTCTCACTTGCTCAACAATGTGGGAGTATTTGGAGAGATGTCAAATGGATTAGACTCTTTCTCTGTTATAAATACGACCCAGAAACAACTTGGAGGCACTGAAACTGGTCATGATGATGCTAAGAATGTGAATGACTTCACTTTTCCCTCAGAGTCTGAATTGCACAAAGCACTTGGATCAGTTGCATATGGAGAGACAGGCAAATTTATGTCGAAATGTATCTCTGTTGAGGAAACATACAATGCTGTTGTTGGCAATTTATGTGGTGCCGCTGATGATACTTCAAGTATATCCAACAGTGTCAGCCATTTTACATCATCTTTTGATGGAAATGCAAGCTTATTGATTGATGAGGCACGACAGGAAAAGGCTAATAGTCATATGCAACCTATTGGTGGACCAAAGCTCTCTAGCACAAGCAAGAAAAGAACAAGAGTTGGTAACAACCAAAAGTCAAGGCCAAGAGATAGACAGCTGATCATGGACAGGATGAAGGAGTTGAGAGAACTTGTCCCCGATGGTGGTAGGTGTAGCATTGACAACCTCTTGGAAAGGACCATAAAGCACATGCTATACTTGAGAAAGATAACAAGCCAGGCTGAGAAACTGAAACGAATTGCCAATCGGGTGGTTCCTGAATGCAAAAGACAGAAAGTCAATGCTAGCCACCCAGGAAGGAGCTGTGCATTTGACTTTGAAAGTGAACTATCATGGCCTATAGTCATAGAAGATCTGGAATGCTCAGGGCACATGCTCATAGAGATGATATGCAATGAGCATGGACTTTTCTTGGAGATTGCACAGGTGATCCGAAAGCTGGATGTTACCATCTTGAAAGGGATCTTGGAAAACCGTTCTAGCAACATCTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATATTCTATGTCCTCTACTGCATCTTCTGCAGCTTAGGAGAAACCCTATCTCGTATAAAAGCTGA 1002 0.4242 MEGEIWSWSHLLNNVGVFGEMSNGLDSFSVINTTQKQLGGTETGHDDAKNVNDFTFPSESELHKALGSVAYGETGKFMSKCISVEETYNAVVGNLCGAADDTSSISNSVSHFTSSFDGNASLLIDEARQEKANSHMQPIGGPKLSSTSKKRTRVGNNQKSRPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRIANRVVPECKRQKVNASHPGRSCAFDFESELSWPIVIEDLECSGHMLIEMICNEHGLFLEIAQVIRKLDVTILKGILENRSSNIWACFIVEVPRGFHRMDILCPLLHLLQLRRNPISYKS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01433 333 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 106 328 IPR043561 GO:0003700|GO:0006355
Pumo5g01433 333 MobiDBLite consensus disorder prediction 139 153 - -
Pumo5g01433 333 MobiDBLite consensus disorder prediction 129 164 - -
Pumo5g01433 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 201 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01433 Pumo-Chr5 37745388 37747533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01433 148 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 45.000 1.36e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01433 - - gmx:100820605 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01433 5 37745388 37747533 Pumo5g01433 5 37745388 37747533 ECH