Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01432 ATGGAAGCCACTTCTATAACGCAGTTGTTGAAGGGCTTTTGTGATCACTCACAATGGAAATATGCTGTTTTTTGGAAGCTTGACCACCATTTTCCTATAAAAGAGATGAGGTTGAGGAAAGCATGTGGGGCGACATCAATTTTCAAATCCCCAGATGAGTTATATTCTTCAAGTGGTGAAAGTACTGATTATTCAGCTCGGCTACTCATGATTGAAATGTCTCATCGTAGATACAGTTTGGGAGAAGGGGTTGTTGGCAAAATAGCTCTTGCCAGGGATCATTGTTGGGTTTCCTGTGAGGATATTCTCACCAGTAAATTTTACACGGATTTAATCCCTGAGTGTCCTGATGAGTGGCTTCTTCAATTTGCATGTGGCATCAAGACTATTGTGCTGGTACCAGTTCTTCCGCTAGGGGTTTTGCAGTTCGGTTCATTTGAAGCGGTTGCTGAAGACAAGGAATTTGTTACCAATATCAAGGAGAAATTTCCATTCCACGCATTATCTGGAAGCAAATATTACCCCTTTAAACTTGGGAACTGA 543 0.4144 MEATSITQLLKGFCDHSQWKYAVFWKLDHHFPIKEMRLRKACGATSIFKSPDELYSSSGESTDYSARLLMIEMSHRRYSLGEGVVGKIALARDHCWVSCEDILTSKFYTDLIPECPDEWLLQFACGIKTIVLVPVLPLGVLQFGSFEAVAEDKEFVTNIKEKFPFHALSGSKYYPFKLGN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01432 180 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 4 163 IPR043561 GO:0003700|GO:0006355
Pumo5g01432 180 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 62 163 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01432 Pumo-Chr5 37742374 37745113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01432 1 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 35.714 5.21e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01432 - - gmx:100820605 273.092