Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01408 ATGGTGACGCTTGCCAAGACGGACGGCTACAAGGCTCCCGAGCTTCAAAGAATGAAGAAATGCAACTCCAGGACTGATGTTTATGCATTCGGAATACTACTGCTTCAAATCTTGATTGGGAAGAAGCCTGGGAAGAACGGTAGAAACGGCGAGTATGTGGACTTGCCTTCGATGGTGAAAGTGGCGGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAACTTTTGAAAGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAGGCACTGAAGCTGGCAATGGGGTGCTGTGCACCAGTGGCATCTGTTAGGCCAAGCATGGAAGAAGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACACCATTTTGA 426 0.4765 MVTLAKTDGYKAPELQRMKKCNSRTDVYAFGILLLQILIGKKPGKNGRNGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01408 141 MobiDBLite consensus disorder prediction 122 141 - -
Pumo5g01408 141 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 119 - -
Pumo5g01408 141 SUPERFAMILY Protein kinase-like (PK-like) 3 117 IPR011009 -
Pumo5g01408 141 MobiDBLite consensus disorder prediction 117 141 - -
Pumo5g01408 141 Pfam Protein kinase domain 4 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01408 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01408 141 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01408 Pumo-Chr5 36933616 36934041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01408 1 141 Receptor kinase-like Gene Family AT3G24660 81.690 5.35e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo5g01408 Pkinase 5.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01408 - - gmx:100814814 271.937