Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01387 ATGGCTTCTTCAACGTTACTATTTCTTCTCATACACACTTTGTCTTTCCACTGTTCACATTCTTCATCTTTATTATCACTGAGAAAGGGCTCATCCCTCTCAGTAGAAAAACCACAAGACGTTATTGTCTCCTCAAACGGCGTCTTCTCCGCTGGCTTTGTTGCCATCGGTGAAAACGCCTACACCTTCGCCATATGGTTCACCCAAACTCATTCCCACAACCACCACCTCACAATCGTGTGGATGGCGAACCGCGAAAACCCCGTGAACGGAAAACGCTCCAAGCTTTCCCTCTTACAAACCGGTAACCTTGTCTTAGACGACGCAGGTCGACAAAGCGTGTGGTCTTCAAACACTGCTTCATTAGCCCCAGCAGAGTTGCATCTCCAAGATGATGGCAATCTCGTGTTGCGTGAGATGCAAGGAACCCTCCTGTGGCAAAGTTTTGATTTCCCCACTGACACTCTTCTTCCCAATCAACCTCTCACGAGACACACACAACTTGTGTCTGCAAGAAGCGAGAGTAGCCATTCATCTGGTTTCTATAAATTTTTCTTCAACCATGACAATGTTCTTACTCTTCACTATGATGGCTACGATGTTTCCAGCTTTTACTGGCCAAGTTCATGGTCAAGTTGGGATGCTGGAAGGTATATTTACAATAGCAGTAGATTCGCGGCGTTGGACTCGCTTGGAAGATTCATTTCATCAGACGGTTTTACTTTTACAACATCTGATTACGGCACTGTAAAGAAGAGAAGATTGAAAATTGATTCTGATGGAAACCTCAGAGTGTATAGTCTGCATGATAATGTGTCAAATAAATGGTATGTTTCATGGCAAGCAAAAATAGACACATGCTATATCCATGGAATTTGTGGAGCTAACAGCGTGTGTAGTTCTGATCCTAAAAATGGAAGGAAGTGCTCGTGTCTTCCGGGACACAGAATGAAGAACCATAGTGATTGGTCTTATGGTTGTGAACCAATGTTTGTTTTCACTTGCAATAGAAGTGAGTCTACCTTCATAGAGATGCCAGGTGTTGAGTTTAATGGCTATGATTCTGTGTTTTTGAAACCATATAATTATAGCTATAGTTGTGAGAATTTGTGCTTGGAAGACTGTGATTGTAAAGGGTTCCAGATCTCATACAGTGATGGCAAGAACTGTTTCAAGTGCTACACGAAGAATCGACTGCTCAACGGGCGGCGTGCATCGAATTTCAAAGGAACAACATACTTGAGAGTGCCTAAAAATTATCATAGCATTTTTCATGAAGAATCTCTGGATACAAATGAGCATGTTTGTTATGTACAGATTCCCAGAGTGTATGTCAGAGATCATGTAAGCCGGTTTGTGAGGTTTTCTCTTTGGGTTGCTATTGCAATTGGTGCTTTTGAAATGGTTTGCATTTTTGTGGTGTGGCTCTTCATAGTTTGGACACGCCAGAAGTCGTCTTCTGCAGATCAACATCTTGTGACAAATAGATTCAGAAAATTTAGTTACTCTGAGCTGAAAAAGGCTACAAAGGGTTTCAGTGAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGTATTTTATCAGATCAAAGGCATGCAGCAATAAAGAGACTTCATAATGCTAAACAAGGAGAAGGGGAATTTCTTGCTGAAGTAGGCATTATTGGAAGGCTCAACCACATGAACTTAATTGAAATGTGGGGATATTGTGTTGAGGGAAAGCATAGGATGTTGGTGTATGAGTACATGGAAAATGGTTCTTTGGCAGAAAATCTCTCATCAAATTCACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACGGCAAGAGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATTAG 1929 0.4158 MASSTLLFLLIHTLSFHCSHSSSLLSLRKGSSLSVEKPQDVIVSSNGVFSAGFVAIGENAYTFAIWFTQTHSHNHHLTIVWMANRENPVNGKRSKLSLLQTGNLVLDDAGRQSVWSSNTASLAPAELHLQDDGNLVLREMQGTLLWQSFDFPTDTLLPNQPLTRHTQLVSARSESSHSSGFYKFFFNHDNVLTLHYDGYDVSSFYWPSSWSSWDAGRYIYNSSRFAALDSLGRFISSDGFTFTTSDYGTVKKRRLKIDSDGNLRVYSLHDNVSNKWYVSWQAKIDTCYIHGICGANSVCSSDPKNGRKCSCLPGHRMKNHSDWSYGCEPMFVFTCNRSESTFIEMPGVEFNGYDSVFLKPYNYSYSCENLCLEDCDCKGFQISYSDGKNCFKCYTKNRLLNGRRASNFKGTTYLRVPKNYHSIFHEESLDTNEHVCYVQIPRVYVRDHVSRFVRFSLWVAIAIGAFEMVCIFVVWLFIVWTRQKSSSADQHLVTNRFRKFSYSELKKATKGFSEEIGRGAGGVVYKGILSDQRHAAIKRLHNAKQGEGEFLAEVGIIGRLNHMNLIEMWGYCVEGKHRMLVYEYMENGSLAENLSSNSLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANY 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01387 642 ProSiteProfiles Bulb-type lectin domain profile. 26 150 IPR001480 -
Pumo5g01387 642 FunFam S-receptor-like serine/threonine-protein kinase 480 584 - -
Pumo5g01387 642 Pfam Protein kinase domain 513 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01387 642 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Pumo5g01387 642 ProSiteProfiles PAN/Apple domain profile. 335 417 IPR003609 -
Pumo5g01387 642 SMART serkin_6 510 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01387 642 CDD PAN_AP_plant 336 417 - -
Pumo5g01387 642 ProSiteProfiles Protein kinase domain profile. 510 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01387 642 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 170 IPR036426 -
Pumo5g01387 642 SMART blect_4 33 152 IPR001480 -
Pumo5g01387 642 Pfam S-locus glycoprotein domain 241 318 IPR000858 GO:0048544
Pumo5g01387 642 Gene3D Phosphorylase Kinase; domain 1 476 584 - -
Pumo5g01387 642 Gene3D Transferase(Phosphotransferase) domain 1 585 642 - -
Pumo5g01387 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Pumo5g01387 642 Gene3D - 152 276 IPR036426 -
Pumo5g01387 642 Pfam D-mannose binding lectin 78 167 IPR001480 -
Pumo5g01387 642 CDD B_lectin 42 152 IPR001480 -
Pumo5g01387 642 SUPERFAMILY Protein kinase-like (PK-like) 487 641 IPR011009 -
Pumo5g01387 642 Gene3D - 25 151 IPR036426 -
Pumo5g01387 642 FunFam Putative receptor protein kinase ZmPK1 21 151 - -
Pumo5g01387 642 PANTHER OS07G0415500 PROTEIN 4 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01387 Pumo-Chr5 36398312 36400240 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01387 387 640 Receptor kinase-like Gene Family AT1G56120 34.256 3.29e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01387 Pkinase 2.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01387 - - gmx:100783758 913.679