Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01386 ATGATCAGAGGAACCAGAGGATATATGGCACCTGAGTGGGTTTACAATTTACCAATAACCTCCAAGGTTGATGTTTACAGCTATGGAATTGTTCTATTGGAGATGATAACTGGAAAAAGCCCAACAAGCTGTGTCCAAAACATAGATGGAGAAGAGTCGTATAATGGAAGGCTAGTAACATGGGTGAGAGAGAAAAGGGGTGCCACATCGTTGCTGAAGCACGTAATTGATCCTGCAATTAAAACAAATTATGATGAATGTAAGATGGTGCTTTTGGCTAAAGTGGCTTTGAACTGTGTGGAGGAAGACAAAGATGCAAGGCCCACCATGAACCAAGTGATCGAAATGCTTCAAAGCAATGATTGTGATCTTTGA 375 0.4107 MIRGTRGYMAPEWVYNLPITSKVDVYSYGIVLLEMITGKSPTSCVQNIDGEESYNGRLVTWVREKRGATSLLKHVIDPAIKTNYDECKMVLLAKVALNCVEEDKDARPTMNQVIEMLQSNDCDL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01386 124 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 119 - -
Pumo5g01386 124 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Pumo5g01386 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01386 124 Pfam Protein kinase domain 3 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01386 124 SUPERFAMILY Protein kinase-like (PK-like) 2 119 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01386 Pumo-Chr5 36397868 36398242 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01386 2 117 Receptor kinase-like Gene Family AT4G23290 43.966 1.33e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01386 Pkinase 1.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01386 - - gmx:100784287 209.534