Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01384 ATGAATTGTATGAATTTATGTTTGCAAGATTGTAACTGCAAAGGGTTTGTGTACAGATATGATGCGGACCAAGGCTTCTCTATCTGCTATACGAAGTTGCAGTTGCTGAATGGGATGCGTTCCCCTGGACTTAAAGGAACACTTTACTTAAGACTGCCTAAGAGCAATAACTTCTCCAAGGGAAAATCACATGTGAGAGAGTATGATAAAGAAGACAATGTCAGAAAGCTGCCAAATCGTTTTGTGATATTTTTTCTTTGGCTTGCTGCTGCAGTTGGAGCTTTAGAAATGATTTGCTTTTTGATGATTTGGTGTTTCTTAATTAGGAAACCCCAAAAGTGTGGTGCAGATCCACAAAGCTTCCATCTTGCAGCAGTGGGATTCAGAAAATTTAGATATTCTGAGTTGAAGGAGGCCACAAAGGGGTTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGGATTGTGTACAAAGGCATTTTATCAGATCAAAGACATGCTGCAATTAAGAGACTCTATGATGCTAAACAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTCAACCACATGAACTTGATTGAAATGTGGGGATATTGGCATAGGTTGTTGGTGTATGAGTACATGGAGAATGGTTCTTTGGCAGAAAATCTGTCATCCAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACAGCAAGGGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATAAGCCCAAGGTAGCAGATTTTGGCTTGTCCAAGCTACGAAACAGGAATAACCTCAACAATTCAAGCTTTTCAATGATCAGAGGAACCAGAGGATATATGGCACCTGAGTGGATTCTCAACCAAGCAATCACCTCCAAAGTTGATGTTTACAGCTATGGAATTGTTCTATTGGAGATGATAACTGGGAAGAGCCCAACAACCATTGATGGAGAAGACTCACACAATGGAAGGCTGGTAGCATGGGTGAGAGAAAAAAGGAGAGGCACATGTTGGCTAGAGCACATGATTGATCCTGCAATTAAAACAAATTATGATGAATGTAAAATGGACGGTTTGGTTGAAGTGGCTTTGAACTGTGTACTGGAAGACAAAGATGCAAGGCCCACCATGAGCCAAGTCGTCGAAATGCTTCAAAGCCATGACAGTGGTCCTTGGTAA 1245 0.4137 MNCMNLCLQDCNCKGFVYRYDADQGFSICYTKLQLLNGMRSPGLKGTLYLRLPKSNNFSKGKSHVREYDKEDNVRKLPNRFVIFFLWLAAAVGALEMICFLMIWCFLIRKPQKCGADPQSFHLAAVGFRKFRYSELKEATKGFSQEIGRGAGGIVYKGILSDQRHAAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYWHRLLVYEYMENGSLAENLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYKPKVADFGLSKLRNRNNLNNSSFSMIRGTRGYMAPEWILNQAITSKVDVYSYGIVLLEMITGKSPTTIDGEDSHNGRLVAWVREKRRGTCWLEHMIDPAIKTNYDECKMDGLVEVALNCVLEDKDARPTMSQVVEMLQSHDSGPW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01384 414 CDD STKc_IRAK 147 407 - -
Pumo5g01384 414 SUPERFAMILY Protein kinase-like (PK-like) 121 406 IPR011009 -
Pumo5g01384 414 PANTHER OS07G0415500 PROTEIN 2 408 - -
Pumo5g01384 414 Pfam Protein kinase domain 144 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01384 414 CDD PAN_AP_plant 3 53 - -
Pumo5g01384 414 Gene3D Phosphorylase Kinase; domain 1 111 211 - -
Pumo5g01384 414 SMART serkin_6 141 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01384 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Pumo5g01384 414 FunFam S-receptor-like serine/threonine-protein kinase 111 211 - -
Pumo5g01384 414 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 212 412 - -
Pumo5g01384 414 ProSitePatterns Protein kinases ATP-binding region signature. 147 169 IPR017441 GO:0005524
Pumo5g01384 414 ProSiteProfiles Protein kinase domain profile. 141 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01384 414 Gene3D Transferase(Phosphotransferase) domain 1 212 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01384 Pumo-Chr5 36378911 36380307 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01384 131 408 Trihelix Transcription Factor Family AT5G38560 41.837 2.63e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01384 Pkinase 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01384 - - gmx:100784287 647.891