Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01381 ATGAACATGGCTTCTTCAATCTTGCTATTTCTTCTCCTACCCTTTTTGTCTTTCCACACTTCACATTCTGCATCTTTGTCATCACTGAGCAAGGGCTCATCCCTCTCGGTAGAAAAACCACAAGATGTTATTGTTTCCCCAAACGGCATCTTCTCCGCCGGCTTTGTCGCCATCGGTGAAAATGCCTACTCCTTCGCCATATGGTTCACACAATCTCAAACTGTCGACCATCCCACAATCGTGTGGATGGCGAACCGCGAAAAGCCTGTGAACGGAAAACGCTCCAAGCTTTCCCTCTTACAGACCGGTAACCTTGTCTTGGATGATGCAGGTCAACAAAGCGTGTGGTCTTCAAACACTGCTTCATTAGCCCCAGCAGAGTTGCGTCTCAAAGATGATGGCAATCTCGTGTTGCGTGAGATGCAAGGAAACCTCCTGTGGCAAAGTTTTGATTTCCCCACTGACACTCTCCTTCCCAATCAACCTCTTATGAGACACACGCAACTCGTGTCCGCGAGAAGCGAGAGTAACCACTCCTCTGGCTTCTACAAGCTCTTCTTCGACGATGACAACGTTCTTCGCCTTCTCTACGACGGCCCTGATGTTTCCAGCGTTTACTGGCCATATCCCTGGCTGGTAAGCTGGGACGCTGGAAGGTCTACTTACAATAGCAGTAGATTCGCGGCGTTGGACTCACTTGGAAGATTCATTTCCTCAGATGATTTTACTTTCACAACATCTGATTATGGCTCTATGAAGCAGAGAAGATTAAAAATCGACTCCGATGGTAACCTCAGAGTGTATAGTCTCCATGATGACGTGTCATACGAATGGCATGTTTCATGGCAAGCGAGAGCTGACCCGTGCAACATCCACGGGGTTTGTGGAGCTAACAGCATGTGTGGTTATGATCCTAAAACTGGAAGGAAGTGCACGTGTCTTCCAGGGCACAGAGTGAAGAACCATAGCGATTGGTCTTATGGTTGTGAACCCATGTTTGGTTTCACTTGCAGTAGAAATGAGTCTACCTTCATAGAGATGCAGGGTGTTGAGCTTTATGGTTATGATGCTAATTTCTCTGAACCTTATACCTATAGCAATTGTGAGAATTTGTGTTTGGAAGATTGCAATTGCAAGGGGTTCCAGCACTCATACAATGATGGCAAGAACGATTACAAGTGCTACACCAAGACACAACTGCTCAATGGGCGGCGTTCACCGAATTTCAAAGGAACAATATACTTGAGAGTGCCCAAAAATCATAGCATTTTTCGTGAAGAATCCATGGTGGCAAGTGAGCATGTTTGTACTGTACAGATTCCCAGAGTGTATGTCATAGATCATGTAAACCGGATTGCGAGGTTTTTCCTTTGGGTTGCTGTTGCCATTGGCGCTTTTGAATCGGTTTGCATTTTTGTGGTGTGGGTCTTCATAGTTAGGACACGCCAAAAGTCTTCAGAAGATCAACATGGCTACCATCTTGTGACAGATAGATTCAGAAAGTTTAGTTATTCTGAGTTGAAGGAGGCAACAAAGGGGTTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGCATCTTATCAGATCAAAGACATGCAGCAATTAAGAGACTCTATGATGCTAAACAAGGAGAAGGGGAATTTCTTGCTGAAGTGAGCATCATTGGTAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCACAGGTTGTTGGTGTATGAGTACATGGAAAATGGGTCTTTGGCAGAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACAGCAAGGGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGCTAGCAGATTTTGGCTTGTCTAAGCTACTAAACAGAAACAACCTCAACAATTCAAGCTTTTCAATGATCAGAGGAACCAGAGGATATATGGCACCTGAGTGGGTTCTCAACTTAGCAATCACCTCCAAGGTTGATGTTTACAGCTATGGGATTGTTTTATTGGGGATGATAACTGGGAAGAGCCCAACAACAGGATCCGTCCCAATGCCAACAAGGCTCTCAACTAGTTCATGA 2175 0.4483 MNMASSILLFLLLPFLSFHTSHSASLSSLSKGSSLSVEKPQDVIVSPNGIFSAGFVAIGENAYSFAIWFTQSQTVDHPTIVWMANREKPVNGKRSKLSLLQTGNLVLDDAGQQSVWSSNTASLAPAELRLKDDGNLVLREMQGNLLWQSFDFPTDTLLPNQPLMRHTQLVSARSESNHSSGFYKLFFDDDNVLRLLYDGPDVSSVYWPYPWLVSWDAGRSTYNSSRFAALDSLGRFISSDDFTFTTSDYGSMKQRRLKIDSDGNLRVYSLHDDVSYEWHVSWQARADPCNIHGVCGANSMCGYDPKTGRKCTCLPGHRVKNHSDWSYGCEPMFGFTCSRNESTFIEMQGVELYGYDANFSEPYTYSNCENLCLEDCNCKGFQHSYNDGKNDYKCYTKTQLLNGRRSPNFKGTIYLRVPKNHSIFREESMVASEHVCTVQIPRVYVIDHVNRIARFFLWVAVAIGAFESVCIFVVWVFIVRTRQKSSEDQHGYHLVTDRFRKFSYSELKEATKGFSQEIGRGAGGVVYKGILSDQRHAAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKLADFGLSKLLNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVLLGMITGKSPTTGSVPMPTRLSTSS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01381 724 FunFam S-receptor-like serine/threonine-protein kinase 481 586 - -
Pumo5g01381 724 PANTHER OS07G0415500 PROTEIN 6 711 - -
Pumo5g01381 724 FunFam Putative receptor protein kinase ZmPK1 23 152 - -
Pumo5g01381 724 Gene3D Phosphorylase Kinase; domain 1 476 586 - -
Pumo5g01381 724 Pfam S-locus glycoprotein domain 239 320 IPR000858 GO:0048544
Pumo5g01381 724 Gene3D Transferase(Phosphotransferase) domain 1 587 721 - -
Pumo5g01381 724 CDD PAN_AP_plant 336 418 - -
Pumo5g01381 724 Gene3D - 152 275 IPR036426 -
Pumo5g01381 724 PIRSF SRK 1 713 IPR024171 GO:0004674
Pumo5g01381 724 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Pumo5g01381 724 Pfam Protein kinase domain 515 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01381 724 SMART blect_4 35 153 IPR001480 -
Pumo5g01381 724 FunFam Protein kinase superfamily protein 587 656 - -
Pumo5g01381 724 SMART serkin_6 512 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01381 724 SUPERFAMILY Protein kinase-like (PK-like) 490 713 IPR011009 -
Pumo5g01381 724 Gene3D - 24 151 IPR036426 -
Pumo5g01381 724 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Pumo5g01381 724 ProSiteProfiles Protein kinase domain profile. 512 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01381 724 Pfam PAN-like domain 337 400 IPR003609 -
Pumo5g01381 724 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 209 IPR036426 -
Pumo5g01381 724 CDD B_lectin 44 153 IPR001480 -
Pumo5g01381 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pumo5g01381 724 ProSiteProfiles Bulb-type lectin domain profile. 20 151 IPR001480 -
Pumo5g01381 724 Pfam D-mannose binding lectin 79 167 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01381 Pumo-Chr5 36128054 36131063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01381 494 716 Trihelix Transcription Factor Family AT5G38560 44.978 1.52e-56 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01381 Pkinase 6.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01381 - - gmx:100783758 1049.65