Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01380 ATGGCTTTCTTGCTTTTTCCTTTACAATGTTCATCTTCCCTATCGTTATTGAACAAGGGGTCCTCCCTCTCAGTGGAGAAACACACAGAAGACGTTATTGTCTCCCCAAATCAAATGTTCTGTGCTGGCTTCTTCCAAGTTGGAGAAAATGCCTTCTCCTTTGCCATATGGTTCAACGAGCCTCACACTCACACCAACAACAACACCGTGGTTTGGATGGCAAACCACGAACAACCCGTTAGTGGAAATCTCTCAAAGCTTTCCCTCTTAAACAGTGGTAACATGGTCTTGCTTGATGCAGGTCAAATCACCACTTGGTCATCAGACACAGCATCACATGCCCCAGTAAAGTTGCATCTCCAAGATGATGGTAATCTTGTGTTGCTTGATCTCCAAGGAACCATTTTGTGGCAAAGTTTTGATTCCCCAACTGATACTCTCCTTCCTGGTCAACCTCTTACCAGATACACACAACTTGTGTCTTCAAGAAGCAAGAGTAACCATTCTTCTGGTTTCTATAAGCTGCTCTTTGATGATAACAACATTAAGGTCTTATTTATAATGCTCCTGATGTTTCAAGCACATATTGGCCTCCAATTTGGCTACTCAGTTGGCAAGCTGGAAGACGGAAATGTTCGTGTGTACAGCAGAAATGAGGCTTTAAAGAAATGGTACGTTTCATGGCAATTCATATTTGATACTTGCACCATTCATGGAATTTGTGGGGCTAACAGCTCTTGCAGTTATGATCCTAAAAGGGGAAGGAGATGCTCGTGTTTACCAGGATACAGAGTGAAGAACCATAGTGATTGGTCTTACGGGTGTGAACCCATGTTTGATCTTACTTGCATTGGAAATGAGTCTACCTTTTTGGGGATACAGGTCGTTGAGTTTTATGGTTATGATCACAAATTTGTCCAAAACAGTACATACATGAACTGTGTGAATTTATGTTTGCAAGATTGTAACTGCAAAGGGTTTCAGTACAGATATGGTGGGGACCAACAATTTAGCTGCTTTACAAAGTTACAGTTGCGGAATGGAAGGCATTCGCCAAGTTATACTGGAACAATTTACTTGAGACTGCCCAACAGCAATAACTTCTCCAAGGAAGAATCTGCGAGTGCAGATGACCATGTTTGTTCTTTGCAGCTTCACAAAGACTATGTTAGAAAGCCAGCAAATCGTTTTGTGAGATTTTCTTTGTGGCTTGCTACTGCAGTTGGAGCTTTAGAAATGGTTTGCCTTTTGATGATTTGGGGTTTCTTGATTAGGACCCGCCAAAAGTCTGCTGCAAATCAACAAGGCTACCATCTTGCAGCAGTGGGAATAAGAAAATTTAGTTATTCTGAGTTGAAGGAGGCGACAAAGGGGTTTAGCCAAGAGATTGGAAGGGGTGGAGGAGGAGTTGTGTACGAAGGCATTTTATCAGATCAAAGACATGCTGCAATAAAGAGACTTTATGATGCTAAACAAGAAGGGGAATTCCTTGCTGAAGTGAGCATCATTGGAAGTCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTACATGGAAAATGGTTCTTTGGCAGAAAATCTCTCATCCAACACACTTGATTGGAATAAGAGATATAACATTGCTCTTGGAATGGCAAGAGTTTTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGGTAGCAGATTTTGGCTTGTCCAAGCTACTAAACAGAAATAACCTCGACAGCAATTCAACTGTTTCGATGATCAGAGGAACTCGAGGATATATGGCACCTGAGTGGGTTTACAATTTACCAATAACCTCCAAAGTGGATGTGTACAGCTATGGAATTGTTCTATTGGAGATGATAACTGGAAAAAGCCCAACAACCGATGGCGGAGGTGAAAGTCAAGATGAACTACAAAGTGTGGAGAAGGAAGGTGAAAAATATGAGGGATATGAAATGGAAGTAAGGGGATATGGTGATGACTATGTTAATAATTTACATGTAGCGTGA 2094 0.4131 MAFLLFPLQCSSSLSLLNKGSSLSVEKHTEDVIVSPNQMFCAGFFQVGENAFSFAIWFNEPHTHTNNNTVVWMANHEQPVSGNLSKLSLLNSGNMVLLDAGQITTWSSDTASHAPVKLHLQDDGNLVLLDLQGTILWQSFDSPTDTLLPGQPLTRYTQLVSSRSKSNHSSGFYKLLFDDNNIKVLFIMLLMFQAHIGLQFGYSVGKLEDGNVRVYSRNEALKKWYVSWQFIFDTCTIHGICGANSSCSYDPKRGRRCSCLPGYRVKNHSDWSYGCEPMFDLTCIGNESTFLGIQVVEFYGYDHKFVQNSTYMNCVNLCLQDCNCKGFQYRYGGDQQFSCFTKLQLRNGRHSPSYTGTIYLRLPNSNNFSKEESASADDHVCSLQLHKDYVRKPANRFVRFSLWLATAVGALEMVCLLMIWGFLIRTRQKSAANQQGYHLAAVGIRKFSYSELKEATKGFSQEIGRGGGGVVYEGILSDQRHAAIKRLYDAKQEGEFLAEVSIIGSLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWNKRYNIALGMARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLLNRNNLDSNSTVSMIRGTRGYMAPEWVYNLPITSKVDVYSYGIVLLEMITGKSPTTDGGGESQDELQSVEKEGEKYEGYEMEVRGYGDDYVNNLHVA 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01380 697 Gene3D - 14 141 IPR036426 -
Pumo5g01380 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Pumo5g01380 697 ProSiteProfiles EGF-like domain profile. 231 269 IPR000742 -
Pumo5g01380 697 PANTHER OS07G0415500 PROTEIN 208 660 - -
Pumo5g01380 697 Gene3D Transferase(Phosphotransferase) domain 1 531 686 - -
Pumo5g01380 697 FunFam S-receptor-like serine/threonine-protein kinase 426 530 - -
Pumo5g01380 697 SUPERFAMILY Protein kinase-like (PK-like) 435 658 IPR011009 -
Pumo5g01380 697 Pfam D-mannose binding lectin 69 155 IPR001480 -
Pumo5g01380 697 SMART serkin_6 457 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01380 697 Pfam Protein kinase domain 460 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01380 697 CDD PAN_AP_plant 279 363 - -
Pumo5g01380 697 Pfam S-locus glycoprotein domain 209 266 IPR000858 GO:0048544
Pumo5g01380 697 ProSiteProfiles PAN/Apple domain profile. 283 363 IPR003609 -
Pumo5g01380 697 ProSiteProfiles Bulb-type lectin domain profile. 18 141 IPR001480 -
Pumo5g01380 697 FunFam Protein kinase superfamily protein 531 600 - -
Pumo5g01380 697 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 186 IPR036426 -
Pumo5g01380 697 Gene3D Phosphorylase Kinase; domain 1 422 530 - -
Pumo5g01380 697 FunFam Putative receptor protein kinase ZmPK1 11 142 - -
Pumo5g01380 697 CDD B_lectin 33 143 IPR001480 -
Pumo5g01380 697 ProSitePatterns Protein kinases ATP-binding region signature. 463 485 IPR017441 GO:0005524
Pumo5g01380 697 PIRSF SRK 1 199 IPR024171 GO:0004674
Pumo5g01380 697 PIRSF SRK 198 682 IPR024171 GO:0004674
Pumo5g01380 697 SMART blect_4 24 143 IPR001480 -
Pumo5g01380 697 ProSiteProfiles Protein kinase domain profile. 457 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01380 Pumo-Chr5 36111339 36117628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01380 446 652 Receptor kinase-like Gene Family AT5G20050 46.154 3.38e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01380 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01380 - - gmx:100785351 1111.67