Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01379 ATGCCAAGAAGATTAACACTGGATTCTGACGGCAACGTTCGTGTGTACAGTAGAAATGAGGCTTTGAAGAAATGGTACGTTTCATGGCTAGTCATATTTGATACTTGCACCATTCATGAAGTTTGTGGTGTTAACAGCACCTGCAATTATGATCCAATAAGGGGAAGGAAATGCTCGTGTCTACCAGGATACAGAGTAAAGAACCAAACTGATTGGTCTTATGGGTGTGAACCCATGTTTGATCTTACTTGCAATGGAAATGAGTCTACGTTTTTGGAGATGCATGGTGTTGAGTTTTACGGTTATGACAGTCATTACGTGCCAAACAGTACCTACATGAATTGTATGAATTTATGTTTGCAAGATTGTAGGTGCAAAGGATTTGAGCTCAGATATGATGGTGACAAAGGCTTCTCTAGCTGCTATACCAAGTTACGGTTTCTGAATGGAAGGAGTTCGCCAAGTTTTAAAGGAGCAATTTTCTTGAGACTGCCAAAGAACAATAACTTCTCCAAGGAAGAATCCGTGAGTGCATATGATCATTTTTGTTCCGTGCAGCTTCACAAAGAATATGTCAGAAAGCTGCCAAATCGTTTTGTGAGATTTTTTCTGTGGCTTGCTACTGCAGTTGGGGCTTTAGAAATGGTTTGCTTTTTGATGATTTGGGGTTTCTTGATTAGGTCACGCCGAAAGTCTAGTGCAGATCAACAAGGCTACCATCTTGCAGCAGTGGGATTCAGAAAATATAGTTATTCGGAGCTGAAGGAAGCTACAAAGGGGTTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGCACTTTATCAGATCAAAGACATGCAGCAATTAAGAGACTCTATGATGCTAAACAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTATTGGAGTAAGAGGTACAACATTGCTCTTGGAATGGCAAGAGTTCTATCATATCTGCATGAAGAGTGCTTGGAGTGGATTTTGCATTGTGATATAAAGCCCCAAAACATACTTGTTGATGCTAGTTATTAG 1092 0.4084 MPRRLTLDSDGNVRVYSRNEALKKWYVSWLVIFDTCTIHEVCGVNSTCNYDPIRGRKCSCLPGYRVKNQTDWSYGCEPMFDLTCNGNESTFLEMHGVEFYGYDSHYVPNSTYMNCMNLCLQDCRCKGFELRYDGDKGFSSCYTKLRFLNGRSSPSFKGAIFLRLPKNNNFSKEESVSAYDHFCSVQLHKEYVRKLPNRFVRFFLWLATAVGALEMVCFLMIWGFLIRSRRKSSADQQGYHLAAVGFRKYSYSELKEATKGFSQEIGRGAGGVVYKGTLSDQRHAAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYYWSKRYNIALGMARVLSYLHEECLEWILHCDIKPQNILVDASY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01379 363 FunFam S-receptor-like serine/threonine-protein kinase 228 329 - -
Pumo5g01379 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Pumo5g01379 363 Pfam S-locus glycoprotein domain 3 67 IPR000858 GO:0048544
Pumo5g01379 363 Gene3D Phosphorylase Kinase; domain 1 224 325 - -
Pumo5g01379 363 ProSiteProfiles PAN/Apple domain profile. 84 183 IPR003609 -
Pumo5g01379 363 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Pumo5g01379 363 PANTHER OS07G0415500 PROTEIN 322 363 - -
Pumo5g01379 363 Gene3D Transferase(Phosphotransferase) domain 1 326 363 - -
Pumo5g01379 363 ProSiteProfiles Protein kinase domain profile. 259 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01379 363 Pfam Protein kinase domain 262 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01379 363 SUPERFAMILY Protein kinase-like (PK-like) 237 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01379 Pumo-Chr5 36021117 36025200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01379 229 363 Receptor kinase-like Gene Family AT1G66980 34.337 2.37e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01379 Pkinase 2.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01379 - - gmx:100785351 619.772