Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01376 ATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTACATGGAAAATGGGTCTTTGGCAGAAAATCTCTCATCCAACACACTTGATTGGAATAAGAGATATAACATTGCTCTTGGAATGGCAAGAGTTTTAGCATATCTGCATGAAGAATGCTTGGAGTGGATATTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGGTAGCAGATTTTGGCTTGTCCAAGCTACTAAACAGAAATAACCTCGACAGCAATTCAACCGTTTCAATAGTCAGAGGAACCCGAGGATATATGGCACCTGAGTGGGTTTTCAATTTACCAATCACCTCCAAAGTGGATGTTTACAGCTATGGAATTGTTCTATTGGAGATGATAGCTGGAAAAAGCCCAACAACCGATATTATTCACTTAACTGACTAA 453 0.3996 MWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWNKRYNIALGMARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLLNRNNLDSNSTVSIVRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEMIAGKSPTTDIIHLTD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01376 150 FunFam Putative receptor-like protein kinase 18 148 - -
Pumo5g01376 150 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01376 150 Gene3D Transferase(Phosphotransferase) domain 1 1 149 - -
Pumo5g01376 150 PANTHER OS07G0415500 PROTEIN 1 142 - -
Pumo5g01376 150 Pfam Protein kinase domain 2 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01376 150 SMART serkin_6 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01376 150 SUPERFAMILY Protein kinase-like (PK-like) 2 144 IPR011009 -
Pumo5g01376 150 ProSitePatterns Serine/Threonine protein kinases active-site signature. 59 71 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01376 Pumo-Chr5 35948220 35950353 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01376 1 139 Receptor kinase-like Gene Family AT5G20050 46.053 2.68e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01376 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01376 - - gmx:100784823 275.018