Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01374 ATGGCTTCCTCAATCTTGCTATTTCTTCTCCTACCCTTTTTGTCTTTCCACACTTCACATTCTGCATCTTTGTCATCACTGAGCAAGGGCTCATCCCTCTCGGTAGAAAAACCACAAGATGTTATTGTTTCCCCAAACGGCATCTTCACCGCCGGCTTTGTCGCCATCGGTGAAAATGCCTACTCCTTCGCCATATGGTTCACACAATCTCAAACTCTCGACCACCCCACAATCGTGTGGATGGCCAACCGCGAAAAGCCCGTGAACGGAAAACGCTCCAAGCTTTCCCTCTTACAAATCGGTAACCTTGTCTTGGATGATGCAGGTCAACAAAGCGTGTGGTCTTCAAACACTGCTTCATTAGCCCCAGCAGAGTTGCGTCTCAAAGATGATGGCAATCTCGTGTTGCATGAGATGCAAGGAACCCTTATTCTGTGGCAAAGTTTTGACTTCCCCACTGACACTCTCCTTCCCAATCAACCTCTTATGAGACACACGCAACTCGTGTCCGCGAGAAGCGAGAGTAACCACTCCTCTGGCTTCTACAAGCTCTTCTTCGACGATGACAACGTTCTTCGCCTTCTCTATGACGGCCCTGATGTTTCTAGCGTTTACTGGCCATATCCCTGGCTGGTAAGCTGGGACGCTGGAAGGTCTACTTACAATAGCAGTAGATTCGCGGCGTTGGACTCACTTGGAAGATTCATTTCCTCAGATGATTTTACTTTCACAACATCTGATTATGGCTCTATGAAGCAGAGAAGATTAAAAATCGACTCCGATGGTAACCTCAGAGTGTATAGTCTCCATGATGACGTGTCATACGAATGGCATGTTTCATGGCAAGCGAGAGCTGACCCGTGCAACATCCACGGGGTTTGTGGAGCTAACAGCATGTGTGGTTATGATCCTAAAACTGGAAGGAAGTGCACGTGTCTTCCAGGGCACAGAGTGAAGAACCATAGCGATTGGTCTTATGGTTGTGAACCCATGTTTGGTTTCACTTGCAGTAGAAATGAGTCTACCTTCATAGAGATGCAGGGTGTTGAGCTTTATGGTTATGATGCTAATTTCTCTGAACCTTATACCTATAGCAATTGTGAGAATTTGTGTTTGGAAGATTGCAATTGCAAGGGGTTCCAGCACTCGTACAATGATGGCAAGAACGATTACAAGTGCTACACCAAGACACAACTGCTCAATGGGCGGCGTTCACCGAATTTCAAAGGAACAATATACTTGAGAGTGCCCAAAAATCATAGCATTTTTCGTGAAGAATCCATGGTGGCAAGTGAGCATGTTTGTACTGTACAGATTCCCAGAGTGTATGTCATAGATCATGTAAACCGGATTGCGAGGTTTTTCCTTTGGGTTGCTGTTGCCATTGGCGCTTTTGAATCGGTTTGCATTTTTGTGGTGTGGGTCTTCATAGTTAGGACACGCCAAAAGTCTTCAGAAGATCAACATGGCTACCATCTTGTGACAGATAGATTCAGAAAGTTTAGTTATTCTGAGTTGAAGGAGGCAACAAAGGGGTTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGCATCTTATCAGATCAAAGACATGCAGCAATTAAGAGACTCTATGATGCTAAACAAGGAGAAGGGGAATTTCTTGCTGAAGTGAGCATCATTGGTAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCACAGGTTGTTGGTGTATGAGTACATGGAAAATGGGTCTTTGGCAGAAAATCTCTCAACCAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACAGCAAGGGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGCTAGCAGATTTTGGCTTGTCTAAGCTACTAAACAGAAACAACCTCAACAATTCAAGCTTTTCAATGATCAGAGGAACCAGAGGATATATGGCACCTGAGTGGGTTCTTAACTTAGCAATCACCTCCAAGGTTGATGTTTACAGCTATGGGATTGTTTTATTGGAGATGATAACTGGGAAGAGCCCAACAACAGGTACTCGCGGCAGAATAAGAGAGTTCCCTCACATTAATTAA 2172 0.4457 MASSILLFLLLPFLSFHTSHSASLSSLSKGSSLSVEKPQDVIVSPNGIFTAGFVAIGENAYSFAIWFTQSQTLDHPTIVWMANREKPVNGKRSKLSLLQIGNLVLDDAGQQSVWSSNTASLAPAELRLKDDGNLVLHEMQGTLILWQSFDFPTDTLLPNQPLMRHTQLVSARSESNHSSGFYKLFFDDDNVLRLLYDGPDVSSVYWPYPWLVSWDAGRSTYNSSRFAALDSLGRFISSDDFTFTTSDYGSMKQRRLKIDSDGNLRVYSLHDDVSYEWHVSWQARADPCNIHGVCGANSMCGYDPKTGRKCTCLPGHRVKNHSDWSYGCEPMFGFTCSRNESTFIEMQGVELYGYDANFSEPYTYSNCENLCLEDCNCKGFQHSYNDGKNDYKCYTKTQLLNGRRSPNFKGTIYLRVPKNHSIFREESMVASEHVCTVQIPRVYVIDHVNRIARFFLWVAVAIGAFESVCIFVVWVFIVRTRQKSSEDQHGYHLVTDRFRKFSYSELKEATKGFSQEIGRGAGGVVYKGILSDQRHAAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSTNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKLADFGLSKLLNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVLLEMITGKSPTTGTRGRIREFPHIN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01374 723 Pfam Protein kinase domain 514 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01374 723 ProSiteProfiles Bulb-type lectin domain profile. 18 149 IPR001480 -
Pumo5g01374 723 Pfam S-locus glycoprotein domain 238 319 IPR000858 GO:0048544
Pumo5g01374 723 SMART blect_4 33 152 IPR001480 -
Pumo5g01374 723 PIRSF SRK 1 714 IPR024171 GO:0004674
Pumo5g01374 723 SMART serkin_6 511 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01374 723 CDD PAN_AP_plant 335 417 - -
Pumo5g01374 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Pumo5g01374 723 Pfam D-mannose binding lectin 77 166 IPR001480 -
Pumo5g01374 723 Gene3D - 151 274 IPR036426 -
Pumo5g01374 723 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Pumo5g01374 723 Pfam PAN-like domain 336 399 IPR003609 -
Pumo5g01374 723 Gene3D - 21 150 IPR036426 -
Pumo5g01374 723 SUPERFAMILY Protein kinase-like (PK-like) 489 712 IPR011009 -
Pumo5g01374 723 CDD B_lectin 42 152 IPR001480 -
Pumo5g01374 723 FunFam Protein kinase superfamily protein 586 655 - -
Pumo5g01374 723 Gene3D Transferase(Phosphotransferase) domain 1 586 721 - -
Pumo5g01374 723 FunFam S-receptor-like serine/threonine-protein kinase 480 585 - -
Pumo5g01374 723 ProSiteProfiles Protein kinase domain profile. 511 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01374 723 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Pumo5g01374 723 PANTHER OS07G0415500 PROTEIN 4 709 - -
Pumo5g01374 723 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 208 IPR036426 -
Pumo5g01374 723 FunFam Putative receptor protein kinase ZmPK1 21 151 - -
Pumo5g01374 723 Gene3D Phosphorylase Kinase; domain 1 475 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01374 Pumo-Chr5 35778454 35780929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01374 500 706 Receptor kinase-like Gene Family AT5G20050 45.455 1.11e-56 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01374 Pkinase 3.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01374 - - gmx:100783758 1045.8