Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01373 ATGAACATGGCTTCCTCAATCTTGCTATTTCTTCTCCTACCCTTTTTGTCTTTCCACACTTCACATTCTGCATCTTTGTCATCACTGAGCAAGGGCTCATCCCTCTCGGTAGAAAAACCACAAGATGTTATTGTTTCCCCAAACGGCATCTTCACCGCCGGCTTTGTCGCCATCGGTGAAAATGCCTACTCCTTCGCCATATGGTTCACACAATCTCAAACTCTCGACCACCCCACAATCGTGTGGATGGCCAACCGCGAAAAGCCCGTGAACGGAAAACGCTCCAAGCTTTCCCTCTTACAGATCGGTAACCTTGTCTTGGATGACGCAGGTCAACAAAGCGTGTGGTCTTCAAACACTGCTTCATTAGCCCCAGCAGAGTTGCATCTCAAAGATGATGGCAATCTCGTGTTGCGTGAGATGCAAGGAACCCTTATTCTGTGGCAAAGTTTTGATTTCCCTACTGACACTCTCCTTCCGGGTCAACCTCTCACGAGACATACACAACTTGTGTCTTCAAGAAGCGAGAGTAACCACTCCTCTGGCTTCTACAAGCTCTTCTTCGACGATGACAACGTTCTTCGTCTTCTCTATGATGGCCCTGATGTTTCCAGCATTTACTGGCCATATCCCTGGCAATTGAGTTGGGATGCTGGAAGGTCTACTTACAACAGCAGTAGATTCGCGGTGTTGGACTCATTTGGAAGATTCAATTCCTCGGATAATTTTAATTTTACAACATCTGATTATGGCACTGTGAAGCAGAGAAGATTGAAAATTGGTTCTGATGGAAACCTCAGAGTATATAGTCAGCATGATGGCGTGTCAAATCAATGGTATGTCTCATGGCAAGTGAAAGGAGACACATGCTACATCCATGGAAATTGTGGAGCTAATAGCGTGTGTAGTTCTCGTCCTAAAAATGGAAGGAAGTGCTCGTGTCTTCCGGGACACAGAATGAAGAACCATAGTGATTGGTCTTATGGTTGTGAACCCATGTTCGTTTTCACTTGCAATAGAAGTGAGTCTACTTTCTTGGAGTTGCCGGGTGTTGAGCTTTATGGTTATGATTCTAATTTTTTGGAACCTAACCCCTCTAGTTATTGTGAGAATTTGTGCTTAGAAGACTGTAATTGTAAAGGGTTCCAGATCTCATACAGTGATGGCAAGAACGATTTCAAGTGCTACACCAAGACACAATTGCTCAATGGGAGGAGAAGACCATTTTTCAAAGGAAGAATGTACTTGAGAGTGCCTAAAAAACATAGCATTTTTCATGAAGAATCCTTGGATGCAAATGAGCATGTTTGTTCTGTACAGATTCCCAGAGTGTATGTCGGTGATCGTGTAAACCGATTTGTGAGGTTTTCTCTTTGGTTTGCTGTTGCAATTGGTGCTTTTGAATCGGTTTGCATTTTTGTGGTGTGGCTCTTCGTAGATAGGACACGCCAAAAGTCTTCAGCAGATCAACAGGGCTACCATCTTGTGACAGATAGATTCAGAAAATTTAGTTATTCTGAGTTGAAGAAGGCAACAAAGGGGTTCAGCCAAGAGATTGGAAGGGGTGCTGGAGGGGTTGTGTACAAAGGCATTTTATCAGATCAAAGAAATGCAGCAATTAAGAGACTCTATGATGCTAAACAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTACATGGAAAATGGGTCTTTGGCAGAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACATCAAGGGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGGTAGCAGATTTTGGCTTGTCCAAGCTACTAAACAGAAACAACCTCAACAATTCAAACTTTTCAATGATCAGAGGAACCAGAGGATATATGGCACCTGAGTGGGTTCTCAACTTTGCAATCACCTCCAAGGTTGATGTTTACAGTTATGGAATTGTTCTATTGGAGATGATAACTGGGAAGAGCCCAACAACAGGATCCGCCCCAATGTCAACAAGGCTCTCAACTCGTTCATGA 2178 0.4316 MNMASSILLFLLLPFLSFHTSHSASLSSLSKGSSLSVEKPQDVIVSPNGIFTAGFVAIGENAYSFAIWFTQSQTLDHPTIVWMANREKPVNGKRSKLSLLQIGNLVLDDAGQQSVWSSNTASLAPAELHLKDDGNLVLREMQGTLILWQSFDFPTDTLLPGQPLTRHTQLVSSRSESNHSSGFYKLFFDDDNVLRLLYDGPDVSSIYWPYPWQLSWDAGRSTYNSSRFAVLDSFGRFNSSDNFNFTTSDYGTVKQRRLKIGSDGNLRVYSQHDGVSNQWYVSWQVKGDTCYIHGNCGANSVCSSRPKNGRKCSCLPGHRMKNHSDWSYGCEPMFVFTCNRSESTFLELPGVELYGYDSNFLEPNPSSYCENLCLEDCNCKGFQISYSDGKNDFKCYTKTQLLNGRRRPFFKGRMYLRVPKKHSIFHEESLDANEHVCSVQIPRVYVGDRVNRFVRFSLWFAVAIGAFESVCIFVVWLFVDRTRQKSSADQQGYHLVTDRFRKFSYSELKKATKGFSQEIGRGAGGVVYKGILSDQRNAAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYNIALGTSRVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLLNRNNLNNSNFSMIRGTRGYMAPEWVLNFAITSKVDVYSYGIVLLEMITGKSPTTGSAPMSTRLSTRS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01373 725 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Pumo5g01373 725 SMART serkin_6 513 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01373 725 Pfam S-locus glycoprotein domain 238 321 IPR000858 GO:0048544
Pumo5g01373 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pumo5g01373 725 FunFam Os07g0541700 protein 588 674 - -
Pumo5g01373 725 FunFam S-receptor-like serine/threonine-protein kinase 482 587 - -
Pumo5g01373 725 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 210 IPR036426 -
Pumo5g01373 725 SMART blect_4 35 154 IPR001480 -
Pumo5g01373 725 Pfam D-mannose binding lectin 79 168 IPR001480 -
Pumo5g01373 725 ProSiteProfiles Bulb-type lectin domain profile. 20 151 IPR001480 -
Pumo5g01373 725 CDD B_lectin 44 154 IPR001480 -
Pumo5g01373 725 SUPERFAMILY Protein kinase-like (PK-like) 489 718 IPR011009 -
Pumo5g01373 725 ProSiteProfiles Protein kinase domain profile. 513 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01373 725 Gene3D - 154 280 IPR036426 -
Pumo5g01373 725 PIRSF SRK 1 722 IPR024171 GO:0004674
Pumo5g01373 725 Gene3D Phosphorylase Kinase; domain 1 477 587 - -
Pumo5g01373 725 PANTHER OS07G0415500 PROTEIN 6 713 - -
Pumo5g01373 725 FunFam Putative receptor protein kinase ZmPK1 23 153 - -
Pumo5g01373 725 Pfam Protein kinase domain 516 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01373 725 Gene3D - 23 153 IPR036426 -
Pumo5g01373 725 CDD PAN_AP_plant 337 419 - -
Pumo5g01373 725 ProSiteProfiles PAN/Apple domain profile. 338 414 IPR003609 -
Pumo5g01373 725 Pfam PAN-like domain 338 401 IPR003609 -
Pumo5g01373 725 Gene3D Transferase(Phosphotransferase) domain 1 588 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01373 Pumo-Chr5 35674331 35677284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01373 495 717 Trihelix Transcription Factor Family AT5G38560 45.415 6.23e-58 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01373 Pkinase 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01373 - - gmx:100783758 1028.47