Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01369 ATGAATATGAGCATGGCCTGGTCAATCACACTCTTTCTTCTAGCATCGTTCTTGTCATTCCCATGTTCATTTTCTGCATCATCATCAACATTGAAAAGGGGCTCTTCCCTCATGGTGGAAAATCCACAAGACGTTCTCATGTCACCAAATGGCAAGTTCTCTGCTGGCTTCCTTGCCATTGGTGAGAACGCATATTCCTTTGCAATATGGTTCACTGAGCCTCATTTCCATAGCCCCAACACCGTCACTTGGATGGCAAACCGTGACCAACCCGTGAATGGAAAGCGCTCCAAACTTTCCGTCACACGCACCGGCAACATAATATTGGTTGATGCTGCTTCCAACACTGCTTGGTCTTCAAACACCGCTTCATTAGCCTCAGCAGAGTTGCATCTCCAAGATGATGGCAATCTCGTGTTACGTGAGTTGCAAGGAACCATTCTGTGGCAAAGTTTTGATTTCCCAACAGACACTCTCCTTCCTGGCCAACATCTTACTAGATTCACACAACTTGTGTCTGCGAGAAGCGAGAGTAACCACTCCTCCGGTTTCTACAAGTTCTTGTTCGACGATGAAAACGTTCTTAGCCTTCACTATGATGGTCCTGATGTTTCAAGCTCTTACTGGCCAAAGCCTTGGCTACTAAGATGGGATGTTGGCAGATCTTATTTCAACAGTAGTAGAATTGGTGTGTTGGATTCTCTTGGCCTTTTCAACTCATCAGATAATTTCACTTTTGTGACATCTGATTATGGCACGGTGCTGCAGAGAAGGTTGAAAATGGATTGTGATGGCAACGTCCGAGTTTATAGCCGGAATAATGTTCTAGAGAAATGGTATGTTTCATGGCAAGCAATTTCTAGTGGTTGCATACCTCATGGGATTTGTGGACCCAACAGCTTGTGTGGTTATGATCCTAAGATTGGAAGAAAATGTTCGTGCCTTCCAGGGCATAGATTAAAGAACCACAGTGATTGGTCTCAAGGGTGTGAACCCATGTTTGATCTTTCTTGCCATAGGAATGAGTCTATCTTCTTGGAGATGCCCGGTGTGGAGTTTTATGGCTATGATAATCATTTTGTGCAAGTTAGCAACTATAGTGCTTGTGAGGATTTGTGCTTGCAAGACTGTACTTGTAAGGGGTTTCAGCATTCCTATAGCGCAAAAAAAGGCTTTGATACTGACTATCATTATAAGTGCTACACAAAAACACAGTTGCTCAATGGACGGCGTTCCCCGATATTCCCAGGAACAACATACTTGAGATTGCCTAAAAGTAATAACTTCTCTGTCAAAGAATCTGCCACTGACACTGTCTATGATCATCATGTTTGTTCAGTCCAACTTCAAAGAGATTATATCAAAGCACATGCAAGCAGTTTTGTGAAGTTTTTCCTGTGGTTTGCTACCGCGCTTGGAGCTTTTGAAATGGTTTGCATTTTTGTGGTTTGGTGCTTCCTATTTAGGACCAGCCAAAAGTCTAAAGCAGATCAACAGGACTACCATCTTACAGCAACAGGATTCAGAAAGTTTAGCTACTCAGAGCTGAAAAGGGCTACAAAGGGGTTCAGTCAAGAGATTGGAAGAGGTGCAGGAGGGGTTGTGTACAAAGGTATTTTATCAGATCAAAGACACGCAGCAATAAAGAGACTTTACAATGCTAAACAAGGAGAAGGGGAGTTTCTTGCTGAGGTAGGAATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATACTGTGCTGAGGGAAAGCATAGGCTATTGGTGTGTGAGTATATGGAGAATGGTTCTTTGGCTCAAAATCTTTCATCTAACACACTAGATTGGAACAAGAGATATAAAATTGCTCTTGATATGGCAAGAGTTCTAGCATATTTACATGAACAATGCTTGGAGTGGATTTTGCACTGTGACATAAAGCCCCAAAACATACTCCTAGATTCCAACTATGAGCCCAAGTTAGCAGACTTTGGCTTGTCTAAGCTCCTCAACAGAAATAACCCCAACAATCCAAGCATCTCTATGATCAGAGGGACCAGAGGATATATGGCACCTGAGTGGGTTTTTAACTTGCCAATCACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGATAACTGGGAAAAGCCCAACAACAAGTATCCAAGACAATAATGGTGAAGAAACATATGATGGCAGGCTGGTGGCATGGGTGAGAGAAAAAAGGAAGAACACCAACACATGTTGGGTGGAGCAAATAATTGAACCAGCTATTGGACCAAATTATGATAAAAGTAAGATGGAAATTTTGACTGCAGTTGCTTTGAACTGTGTAATGGAAGACAAAGATTCAAGGCCCACCATGAGCCAAGTAGTTGAGATGCTTCAATGTCACGGCAGCGATCCTCAGTGA 2415 0.4257 MNMSMAWSITLFLLASFLSFPCSFSASSSTLKRGSSLMVENPQDVLMSPNGKFSAGFLAIGENAYSFAIWFTEPHFHSPNTVTWMANRDQPVNGKRSKLSVTRTGNIILVDAASNTAWSSNTASLASAELHLQDDGNLVLRELQGTILWQSFDFPTDTLLPGQHLTRFTQLVSARSESNHSSGFYKFLFDDENVLSLHYDGPDVSSSYWPKPWLLRWDVGRSYFNSSRIGVLDSLGLFNSSDNFTFVTSDYGTVLQRRLKMDCDGNVRVYSRNNVLEKWYVSWQAISSGCIPHGICGPNSLCGYDPKIGRKCSCLPGHRLKNHSDWSQGCEPMFDLSCHRNESIFLEMPGVEFYGYDNHFVQVSNYSACEDLCLQDCTCKGFQHSYSAKKGFDTDYHYKCYTKTQLLNGRRSPIFPGTTYLRLPKSNNFSVKESATDTVYDHHVCSVQLQRDYIKAHASSFVKFFLWFATALGAFEMVCIFVVWCFLFRTSQKSKADQQDYHLTATGFRKFSYSELKRATKGFSQEIGRGAGGVVYKGILSDQRHAAIKRLYNAKQGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKHRLLVCEYMENGSLAQNLSSNTLDWNKRYKIALDMARVLAYLHEQCLEWILHCDIKPQNILLDSNYEPKLADFGLSKLLNRNNPNNPSISMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSPTTSIQDNNGEETYDGRLVAWVREKRKNTNTCWVEQIIEPAIGPNYDKSKMEILTAVALNCVMEDKDSRPTMSQVVEMLQCHGSDPQ 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01369 804 Pfam D-mannose binding lectin 81 167 IPR001480 -
Pumo5g01369 804 Gene3D Hepatocyte Growth Factor 345 428 - -
Pumo5g01369 804 CDD PAN_AP_plant 334 424 - -
Pumo5g01369 804 Gene3D - 24 154 IPR036426 -
Pumo5g01369 804 FunFam Putative receptor protein kinase ZmPK1 25 154 - -
Pumo5g01369 804 Pfam Protein kinase domain 524 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01369 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pumo5g01369 804 SUPERFAMILY Protein kinase-like (PK-like) 497 797 IPR011009 -
Pumo5g01369 804 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Pumo5g01369 804 ProSiteProfiles PAN/Apple domain profile. 338 427 IPR003609 -
Pumo5g01369 804 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01369 804 CDD STKc_IRAK 527 797 - -
Pumo5g01369 804 Pfam S-locus glycoprotein domain 241 321 IPR000858 GO:0048544
Pumo5g01369 804 ProSiteProfiles Protein kinase domain profile. 521 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01369 804 Gene3D Phosphorylase Kinase; domain 1 486 595 - -
Pumo5g01369 804 PANTHER OS07G0415500 PROTEIN 8 800 - -
Pumo5g01369 804 FunFam S-receptor-like serine/threonine-protein kinase 490 595 - -
Pumo5g01369 804 ProSiteProfiles Bulb-type lectin domain profile. 22 153 IPR001480 -
Pumo5g01369 804 CDD B_lectin 46 155 IPR001480 -
Pumo5g01369 804 PIRSF SRK 1 803 IPR024171 GO:0004674
Pumo5g01369 804 SMART blect_4 36 155 IPR001480 -
Pumo5g01369 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 167 IPR036426 -
Pumo5g01369 804 Gene3D Transferase(Phosphotransferase) domain 1 596 802 - -
Pumo5g01369 804 FunFam Putative receptor-like protein kinase 596 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01369 Pumo-Chr5 35426449 35428863 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01369 511 796 Trihelix Transcription Factor Family AT5G38560 40.614 6.02e-61 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01369 Pkinase 9.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01369 - - gmx:100783758 1320.45