LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g01360	ATGGGTGGGGAGCGCAAGGTTTACACTTTGGCTCAAGTATCTGAGCACAACACCTCCAAAGATTGCTGGCTTATCATTGATGGAAAGGTTTATGATGTCACAAAATTCTTAGATGACCATCCTGGTGGGGATGATGTCTTGTTGTCTTCCACAGGGAAAGATGCCACTGATGACTTTGAGGATGTTGGTCACAGTAAAAGTGCTAGAGCCATGTTGGATGATTTATATGTTGGAGACATTGATCCATCAACCATCCCTACCAAGGTTCAGAACACTCTTCCAAAACAACCTCAAAATAATCAGGACAAGGCACCATCATCATCAGACTTCATGATCAAGATGCTCCAGTTTCTAGTTCCCCTGATTATCTTGGGTGTTGCGGTTGGTATTCGTTTCTACAGCTCCAAATCAACATAG	417	0.4317	MGGERKVYTLAQVSEHNTSKDCWLIIDGKVYDVTKFLDDHPGGDDVLLSSTGKDATDDFEDVGHSKSARAMLDDLYVGDIDPSTIPTKVQNTLPKQPQNNQDKAPSSSDFMIKMLQFLVPLIILGVAVGIRFYSSKST	138

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g01360	138	ProSitePatterns	Cytochrome b5 family, heme-binding domain signature.	36	43	IPR018506	GO:0020037
	Pumo5g01360	138	SUPERFAMILY	Cytochrome b5-like heme/steroid binding domain	4	87	IPR036400	-
	Pumo5g01360	138	SMART	Cyt_b5_2	8	81	IPR001199	-
	Pumo5g01360	138	Pfam	Cytochrome b5-like Heme/Steroid binding domain	9	80	IPR001199	-
	Pumo5g01360	138	ProSiteProfiles	Cytochrome b5 family, heme-binding domain profile.	5	81	IPR001199	-
	Pumo5g01360	138	Gene3D	-	2	86	IPR036400	-
	Pumo5g01360	138	FunFam	Cytochrome b5 type B	3	85	-	-
	Pumo5g01360	138	PANTHER	CYTOCHROME B5	4	135	-	-
	Pumo5g01360	138	PRINTS	Cytochrome B5 signature	68	80	IPR001199	-
	Pumo5g01360	138	PRINTS	Cytochrome B5 signature	30	40	IPR001199	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g01360	Pumo-Chr5	35255914	35258601	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g01360	1	134	NADPH P450 reductases	AT5G48810	66.176	9.72e-65	192

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g01360	K23490		-	gmx:100798640	251.521

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