Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01357 ATGGCTGCCTCAATCTTACTGTTTCTTCTCCTTCCCGCTTTGTCTTTCCACGCTTCACATTCTGCATCTTTATCATATTCATCACTGAGCAAGGGCTCTTCCCTCTCAGTACAGAAACGACAAGACGTTATTGTCTCCCCAAACGGCATCTTCTCTGCTGGCTTTGTCGCCATCGGCGTAAACGCCTACTCCTTCGCCATATGGTACACAAAAACAAGTTCTCACAACAACCAACCCACAATCGTGTGGATGGCGAACCGCAGAAACCCCGTGAATGGAAAACGCTCCAGGCTTTCCCTCTTCCAAACCGGTAACCTTGTCTTGGACGACGCGGGTCAGCAAAGCGTGTGGTCTTCAAACACCGAATCATACGCTCCAGCAGAGTTGCATCTGAAAGATAATGGCAATCTTGTGTTGCGTGAGCTGCAAGGAACCCTTATTCTGTGGCAAAGTTTTGATTTTCCCACCGATACTCTCCTTCCGGGTCAACCTCTCACGAGACACACACAACTTGTGTCTTCAAGAAGCGAGAGTAACCACTCCTCTGGCTTCTACAAGCTGTTCTTCGACGATGACAACGTTCATCGGCTTCTCTATGATGGCCCTGATGTTTCCAGCATTTACTGGCCATATCCCTGGCTATTGAGTTGGGATGCTGGAAGGTCTACTTACAACAGCAGTAGATTCGCGGTGTTGAACTCATTTGGAAGATTCAATTCCTCGGATAATTTTAATTTTACAACATCTGATTATGGCACTGTGAAGCAGAGAAGATTGAAAATTGGTTCTGATGGAAACCTCAGAGTATATAGTCAGCATGATGTTGCGTCAAATCAATGGCATGTCTCATGGCAAGTGAAAGGAGACACATGCTACATCCATGGAAATTGTGGAGCTAACAGCGTGTGTAGTTCTCGTCCTAAAAATGGAAGGAAGTGCTCGTGTCTTCCGGGACACAGAATGAAGAGCCATAGTGATTGGTCTTATGGTTGTGAACCCATGTTCGTTTTCACTTGCAATAGAAGTGAGTCTACTTTCTTGGAGTTGCCGGGTGTTGAGCTTTATGGTTATGATTCTAATTTTTTGGAACCTAATACCTCTAGTTATTGTGAGAATTTGTGCTTAGAAGACTGTAATTGTAAAGGGTTCCTGATCTCATACAGTGATGGCAAGAACGATTTCAAGTGCTACACCAAGACGCAATTGCTCAATGGGAGGCGCAGACCATTTTTCAAAGGAAGAATGTACTTGAGAATTCCCAGAGTTTATGTTGGTGATCGTGTAAACCGATTTGTGAGGTTTTCTCTTTGGTTTGCTGTTGCCATTGGTGCTTTTGAATCGGTTTGCATTTTTGTGGTGTGGCTCTTCCTATATAGGACATGCCAAAAGTCTTCAGCAGATCAACAGGGCTACCATCTTGTGACAGATAGATTCAGAAAATTTAGTTATTCTGAGTTGAAGAAGGCAACAAAGGGGTTCAGCCAAGAGATTGGAAGGGGTGCTGGAGGGGTTGTGTACAAAGGCATTTTATCAGATCAAAGACATGCAGCAATTAAGAGACTCTATGATGCTAAACAAGGAGAAGGGGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACCTGATTGAAATGTGGGGATATTGTGTTGAGGGAAAGCATACATTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTGTCATCTAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACAGCAAGAGTTTTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAGTTATCTGCCCAAGGTAGCAGATTTTGGCTTGTCCAAGCTACTGAACAGAAATAACCTCAGCAATTCAAGCTTTTCAATGATCAGAGGAACCAGAGGATATATGGCACCTGAGTGGGTTCTTAACTTAGCAATCACCTCCAAGGTTGATGTTTACAGTTATGGAATTGTTGTATTGGAGATGATAACTGGGAAGAGCCCAACAACAGGTTTCCAAAACATTGATGGAGAAGACTCATACAATGGAAGGCTTGTACAATGGGTGAGAGAGAAAAGGAGTGTCACATCTTGGCTAGAGCACATCATTGATCCTGCAATTAAAACAAATTATGATGAATACAAGATGGAGCTTTTGGCCAAAGTGGCTTTGGACTGTGTAGAGGAAGACAAAGATATAAGGCCAACCATGAGCCAAGTGGTAGAAATGCTTCAGAGTCATGAAAGTGATCCTCAATAA 2319 0.4312 MAASILLFLLLPALSFHASHSASLSYSSLSKGSSLSVQKRQDVIVSPNGIFSAGFVAIGVNAYSFAIWYTKTSSHNNQPTIVWMANRRNPVNGKRSRLSLFQTGNLVLDDAGQQSVWSSNTESYAPAELHLKDNGNLVLRELQGTLILWQSFDFPTDTLLPGQPLTRHTQLVSSRSESNHSSGFYKLFFDDDNVHRLLYDGPDVSSIYWPYPWLLSWDAGRSTYNSSRFAVLNSFGRFNSSDNFNFTTSDYGTVKQRRLKIGSDGNLRVYSQHDVASNQWHVSWQVKGDTCYIHGNCGANSVCSSRPKNGRKCSCLPGHRMKSHSDWSYGCEPMFVFTCNRSESTFLELPGVELYGYDSNFLEPNTSSYCENLCLEDCNCKGFLISYSDGKNDFKCYTKTQLLNGRRRPFFKGRMYLRIPRVYVGDRVNRFVRFSLWFAVAIGAFESVCIFVVWLFLYRTCQKSSADQQGYHLVTDRFRKFSYSELKKATKGFSQEIGRGAGGVVYKGILSDQRHAAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCVEGKHTLLVYEYMENGSLAENLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDASYLPKVADFGLSKLLNRNNLSNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVVLEMITGKSPTTGFQNIDGEDSYNGRLVQWVREKRSVTSWLEHIIDPAIKTNYDEYKMELLAKVALDCVEEDKDIRPTMSQVVEMLQSHESDPQ 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01357 772 Gene3D Phosphorylase Kinase; domain 1 457 565 - -
Pumo5g01357 772 CDD PAN_AP_plant 338 420 - -
Pumo5g01357 772 PANTHER OS07G0415500 PROTEIN 4 770 - -
Pumo5g01357 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Pumo5g01357 772 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 212 IPR036426 -
Pumo5g01357 772 ProSiteProfiles Protein kinase domain profile. 491 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01357 772 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Pumo5g01357 772 Gene3D - 154 283 IPR036426 -
Pumo5g01357 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 771 - -
Pumo5g01357 772 Pfam S-locus glycoprotein domain 234 322 IPR000858 GO:0048544
Pumo5g01357 772 SUPERFAMILY Protein kinase-like (PK-like) 467 765 IPR011009 -
Pumo5g01357 772 Pfam D-mannose binding lectin 80 169 IPR001480 -
Pumo5g01357 772 PIRSF SRK 1 772 IPR024171 GO:0004674
Pumo5g01357 772 FunFam S-receptor-like serine/threonine-protein kinase 460 565 - -
Pumo5g01357 772 CDD B_lectin 44 155 IPR001480 -
Pumo5g01357 772 SMART blect_4 35 155 IPR001480 -
Pumo5g01357 772 Pfam Protein kinase domain 494 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01357 772 ProSiteProfiles PAN/Apple domain profile. 339 415 IPR003609 -
Pumo5g01357 772 ProSiteProfiles Bulb-type lectin domain profile. 20 152 IPR001480 -
Pumo5g01357 772 CDD STKc_IRAK 497 765 - -
Pumo5g01357 772 Pfam PAN-like domain 339 402 IPR003609 -
Pumo5g01357 772 FunFam Putative receptor protein kinase ZmPK1 23 154 - -
Pumo5g01357 772 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01357 772 Gene3D - 23 153 IPR036426 -
Pumo5g01357 772 Gene3D Transferase(Phosphotransferase) domain 1 566 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01357 Pumo-Chr5 35092153 35094540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01357 473 768 Trihelix Transcription Factor Family AT5G38560 40.328 2.22e-64 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo5g01357 Pkinase 7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01357 - - gmx:100784287 1127.85