Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01348 ATGTACACTGTTATTTACCTTATGCAGTATCGCAAACCAGAGGAACAAAGAGGATACGAAGACTTTGGCTTAGCTCGAACATTGAGGGGAGATCAAATTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTATTCGTGGGCATTTCTCAATGAAATCAGATGTGTTTAGTTATGGTGTGATAGTGTTAGAGATTGCATGGGGATTATGGATTGAAGAGAGGGCATTGGAACTATTGGATGAAGTGTTAAAGGAAAGGTTCACACCTTTGGAGGCCTTACGATGCATACAGGTGGGGCTGTTATGCGTGAAACAAAGACCATAA 348 0.4224 MYTVIYLMQYRKPEEQRGYEDFGLARTLRGDQIEANTNRVAGTYGYMPPEYAIRGHFSMKSDVFSYGVIVLEIAWGLWIEERALELLDEVLKERFTPLEALRCIQVGLLCVKQRP 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01348 115 Pfam Protein tyrosine and serine/threonine kinase 21 74 IPR001245 GO:0004672|GO:0006468
Pumo5g01348 115 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01348 115 Gene3D Transferase(Phosphotransferase) domain 1 19 115 - -
Pumo5g01348 115 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 115 - -
Pumo5g01348 115 SUPERFAMILY Protein kinase-like (PK-like) 21 111 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01348 Pumo-Chr5 33912355 33913129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01348 21 115 Receptor kinase-like Gene Family AT4G11530 48.718 1.12e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo5g01348 PK_Tyr_Ser-Thr 1.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01348 - - gmx:100786515 158.303