Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01327 ATGGTAACCATTCGTGCAGATGAAATTAGTAAAATTATCCGTGAACGCATTGAGCAATATAATATGGAAGTAAAAATTGTAAATACAGGTATCGTACTTCAAGTAGGCGATGGTATTGCTCGTATTTATGGTCTTGATGAAGTAATGGTGGGTGAATTAGTGGAATTTGAAAAGGGTACTATAGGCATTGCCTTGAATTTGGAATCAAAAAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAAGGAAGTTCAGTAAAAGCAACAGGAAAAATTGGTCTTATACCAGTAAATGAGGCTTATTTGGGTCGTGTTATAAATGCCCTGGCGAAACCAATTGATGGTCGAGGAGAAATTTCAGCTTCGGAATCTCGATTAATCGAATCTCCCGCTCCCGGTATTATTTTGAGATGTTCCGTATATGAGCCTCTCCAAATAGGACTTATTGCTATTGATTCGATGATCCCCATAGGACGTGGCCAGCGAGAATTAATTATTGGAGATAGACAAACGGGTAAAATAGCAGTAGCCACAGAGACAATTCTTAATCCACAGGGACAAAATGTAATATGTGTTTATGTAGCTGTTGGTCAAAAAGCATCTTCTCTGGCTCAAGTGGTGACTACCTTACAAGAAAGAGGAGCAATGGAATACACTATTGTAGTAGCTAAAACAGCGGATTCTTCAGCTACATTACAATACCTCGCCCCTTATATAGGAGCAGCTCTGATTGAATATTTTATGTACCGTGAACGTCACACTTTAATCATTTATGACAATCTCTCCAAACAAGCACATGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCTGGTCGTGAAGCTTATCCAGGGGATGTAAGGAAATTTCTTGTTGAGTTACGTGCTTACTTTAAGATGAATAAACCTCAATTCAAAGAAATCATATCTTCTACCAAGACATTCACTGGGGAAGCAGAAGCCCTTTTGAAAGAAGCTATTCAGGAACAGATGGAACTATTTTTACTATAG 1023 0.3832 MVTIRADEISKIIRERIEQYNMEVKIVNTGIVLQVGDGIARIYGLDEVMVGELVEFEKGTIGIALNLESKNVGVVLMGDGLMIQEGSSVKATGKIGLIPVNEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIILRCSVYEPLQIGLIAIDSMIPIGRGQRELIIGDRQTGKIAVATETILNPQGQNVICVYVAVGQKASSLAQVVTTLQERGAMEYTIVVAKTADSSATLQYLAPYIGAALIEYFMYRERHTLIIYDNLSKQAHAYRQMSLLLRRPPGREAYPGDVRKFLVELRAYFKMNKPQFKEIISSTKTFTGEAEALLKEAIQEQMELFLL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01327 340 Gene3D - 97 334 IPR027417 -
Pumo5g01327 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 299 IPR027417 -
Pumo5g01327 340 Pfam ATP synthase alpha/beta family, beta-barrel domain 29 93 IPR004100 GO:0046034|GO:1902600
Pumo5g01327 340 FunFam ATP synthase subunit alpha, mitochondrial 95 318 - -
Pumo5g01327 340 FunFam ATP synthase subunit alpha 1 94 - -
Pumo5g01327 340 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 95 IPR036121 GO:0046034|GO:1902600
Pumo5g01327 340 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 150 297 IPR000194 GO:0005524
Pumo5g01327 340 Gene3D - 3 94 IPR023366 -
Pumo5g01327 340 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 2 291 IPR005294 GO:0015986|GO:0045261|GO:0046933
Pumo5g01327 340 CDD ATP-synt_F1_alpha_N 28 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01327 Pumo-Chr5 32714264 32715523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01327 87 289 Primary Pumps ATPases(2) AT1G76030 27.273 5.87e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01327 K02111 - qlo:115973766 533.102