Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01318 ATGCTTCAGATTCGGCTTAGTAAGGCTCCTGCATCAGAAGGGTCGGCAGGGGTGAAGCTGCCGCCAGTTGAGACTGTTACAGTTGCGTGCCCTGACCATCTGGTCCTTGCTGATCTTCCTGTAGCAAAGCGCATTGGTGCAGCCACTGCTGCTTCCCTTGTTAAGACTTTGGGCCAAGAGCTTCGGTTGGCGGTGGCCTACGTGGTCCGGAACAACCTCAAGGCCAAGGTTGTCACAAAATTCTCACACACCATTCCCAAGTTAGTTTGCCCACACGAAAACACCAGTGTCAACAACAGCAGTGCAACGTTGCTTATCAGCACGGAGAAGTACGACTCCGGCATCGAAATCGACGCTTTGAATATGGCTATGACTGCTGATGCGGGCGTGGGGTTTCGCCGATTGATCGATGCGGTCAAGGGTGCTGGGTTCAGCTTGGTGGCTGTGCCTTATTGGGAGGGTGTCACCGTTGCGGGGCTTATTAGCACCGGGGCACATCGTAGCTCTTGGTGGGGGAAAGGGGGTTCTGTTCATGATCATGTTGTGGGGGTTAGTATTGTTGTCCCTGCTTCTAAATATGAAGGGTATGTAAAGATTTTGAGACTCGAGGGGCAGGATCCGATGCTTAATGCAGCCAAAGTGTCACTCGGAGTGCTGGGTGCCATCTCTAAGACATTTATGACCGAAAGGTGA 693 0.5253 MLQIRLSKAPASEGSAGVKLPPVETVTVACPDHLVLADLPVAKRIGAATAASLVKTLGQELRLAVAYVVRNNLKAKVVTKFSHTIPKLVCPHENTSVNNSSATLLISTEKYDSGIEIDALNMAMTADAGVGFRRLIDAVKGAGFSLVAVPYWEGVTVAGLISTGAHRSSWWGKGGSVHDHVVGVSIVVPASKYEGYVKILRLEGQDPMLNAAKVSLGVLGAISKTFMTER 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01318 230 Pfam FAD binding domain 100 189 IPR006094 GO:0050660
Pumo5g01318 230 SUPERFAMILY FAD-binding/transporter-associated domain-like 94 225 IPR036318 GO:0050660
Pumo5g01318 230 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 230 IPR016166 GO:0071949
Pumo5g01318 230 PANTHER GULONOLACTONE OXIDASE 53 225 - -
Pumo5g01318 230 Gene3D - 113 228 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01318 Pumo-Chr5 32279571 32282335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01318 1 73 C2H2 Transcription Factor Family AT5G01160 49.351 7.66e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01318 K00103 - gmx:100778616 255.373