Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01272 ATGTTTTCAACGGCCACCGCAGACGGTGTTTCGGCGCCGTACAATTCCACGGTGGCGACGATGGTGGGGCGGCGGCGGATTCCGATACACACGACGTTCTACTGGGGGCACAAGGTGGACATACTTTTCCGGTGCTGGCCCGGCGACAGTGCCGCCATGTACGCGGTGGCGCTGCTCCTGGTGTTCTTCATGGCGGTGCTGGTGGAGTGGCTTTCGTTCACTAACATTGTGAAGCTGAAGCCTGGGGGCTCAAACGACGTCGTTGGGGGCCTCCTCAAGACGGGGCTATACGGCGTGCGTTCCGGGCTCTCTTATATGGTGATGCTGGCCGTCATGTCGTTTAATGGGGGCGTGTTTGTCGTTGCAATTTGTGGCCACGTCATCGGGTTCTTGATTTTCGGGACGCGGGCTATAATGAAGAAATCGGGTGGGTTGGATTCATCGAAACCGTAG 453 0.5784 MFSTATADGVSAPYNSTVATMVGRRRIPIHTTFYWGHKVDILFRCWPGDSAAMYAVALLLVFFMAVLVEWLSFTNIVKLKPGGSNDVVGGLLKTGLYGVRSGLSYMVMLAVMSFNGGVFVVAICGHVIGFLIFGTRAIMKKSGGLDSSKP 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01272 150 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 28 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pumo5g01272 150 Pfam Ctr copper transporter family 32 74 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pumo5g01272 150 Pfam Ctr copper transporter family 91 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01272 Pumo-Chr5 30560378 30561247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01272 32 142 Inorganic Solute Cotransporters AT5G59030 48.649 6.83e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01272 K14686 - gmx:100803410 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01272 5 30560378 30561247 Pumo5g01272 5 30560378 30561247 ECH