Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01266 ATGTATATGTCTCCAGGCCAAGACATGCCATCCATGTCCATGTCTAATGGCACAAACAACATGAAGATGATGATGCACATGAGTTTCTACTGGGGCAAAGATGCCATAGTGCTTTTTCCTGGGTGGCCTGAGAGCAATGTTGGCATGTACATCTTAGCTTTAGTTTTTGTGTTCTTCCTAGCCATGGCTACTGAAGTGTTATCTAACCAACCATTCATCAAACCTGGGACTAGTCCCTTTGTGGGAGGGCTTATTCAAGCTAGGTGTGCACTTATTTCGAATCAGCTTCATTTACATGGTGATGCTTGCTGTCATGTCCTTCAACGGGGGAATCTTCATAGTTGCTGTGATTGGCCACACCTTGGGATTCTTCATTGCCAAGACTCGTGCTCTTGCCATCGCCAATAG 408 0.4534 MYMSPGQDMPSMSMSNGTNNMKMMMHMSFYWGKDAIVLFPGWPESNVGMYILALVFVFFLAMATEVLSNQPFIKPGTSPFVGGLIQARCALISNQLHLHGDACCHVLQRGNLHSCCDWPHLGILHCQDSCSCHRQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01266 135 Pfam Ctr copper transporter family 27 68 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pumo5g01266 135 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 67 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01266 Pumo-Chr5 30445874 30446433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01266 24 96 Inorganic Solute Cotransporters AT5G59040 39.726 1.84e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01266 K14686 - gmx:100527849 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01266 5 30445874 30446433 Pumo5g01266 5 30445874 30446433 ECH