Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01260 ATGGTGGAGGAAATACATATGCTAGAATCACAGCAAGGTCAGAAAAGGCGCCAGAGAGAAGAACAAAGTAGGAACAATTTAAGTGATCATTTACCTTCAGAAAACTCTCTTGTTACTGAGAATCCATCCACCTCCATGGAAAAGTTTCATGATGCCCCTTATAAACAACACACTAGAAATGAACTTGCTAATATGCAAGTGAGGAGTCAGGAACAGCTGAATCAGACCAACACAAGCAATCAGCAAGTGGGTGTTGGAGTGAGCAATAACAATGGTGTGTCTCTCACACTTGGTCTTCATCAAAATCATCATCATGGTATTGGGTTGTCTGAGCCCTTTAGCTTGAGTGCTGCAGCTCAACGTTTTGGTGTTGCCCTTCAGCCTCATGAGGGCTATGTTATAAGTGGTTTTGAATCACAAAATCGACACTTTGGAAGAGATGTTATTGGAGGAGCTGGGCAACTGTTGCATGATTTTGTAGGCTGA 486 0.4239 MVEEIHMLESQQGQKRRQREEQSRNNLSDHLPSENSLVTENPSTSMEKFHDAPYKQHTRNELANMQVRSQEQLNQTNTSNQQVGVGVSNNNGVSLTLGLHQNHHHGIGLSEPFSLSAAAQRFGVALQPHEGYVISGFESQNRHFGRDVIGGAGQLLHDFVG 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01260 161 MobiDBLite consensus disorder prediction 28 46 - -
Pumo5g01260 161 MobiDBLite consensus disorder prediction 1 27 - -
Pumo5g01260 161 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01260 Pumo-Chr5 30245460 30245945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01260 1 161 Homeobox Transcription Factor Family AT5G02030 35.260 2.37e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01260 - - vun:114185080 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01260 5 30245460 30245945 Pumo5g01260 5 30245460 30245945 ECH